Pairwise Alignments

Query, 613 a.a., Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal from Pseudomonas syringae pv. syringae B728a

Subject, 619 a.a., ABC transporter ATP-binding protein from Pseudomonas sp. SVBP6

 Score =  201 bits (510), Expect = 1e-55
 Identities = 108/254 (42%), Positives = 159/254 (62%), Gaps = 4/254 (1%)

Query: 5   IRVQDLRVVADGDHGELEIVKGVSFALEKGEVLALIGESGSGKTTIALALLGYARRGCKL 64
           ++VQ+LRV  +      +I+  ++F L  GE+L L+GESGSGKTT+A ALL +ARRG ++
Sbjct: 37  LQVQNLRVELNTS---ADIIDHINFTLASGEILGLVGESGSGKTTLATALLAHARRGARI 93

Query: 65  AGGVVQVGAHDMLSLPESQLQGLRGNRVSYIAQSAAAAFNPAKKLIDQVIEGALIHGLG- 123
           A G +QV    +L L    L+  RG  + Y+AQ  A A NPA ++   ++E    H    
Sbjct: 94  AAGHIQVADVSLLELHGEPLRQARGGLIGYVAQDPAQALNPALRIGPLLLETLHAHEPQL 153

Query: 124 SRAELEAKAVELFRDLALPNPESIGRRYPHQVSGGQLQRVMAAMALISDPLLVILDEPTT 183
            +A  + +  +   D+ LP      +R+PHQ+SGGQ QRVM A+A +  P L++LDEPTT
Sbjct: 154 PKAAQQQRLQQTLLDVGLPGDAQFLQRFPHQLSGGQQQRVMLALAFVLRPRLIVLDEPTT 213

Query: 184 ALDVTTQIDVLRAFKRVVRDRGATAVYVSHDLAVVAQMADQIVVLNGGRIIEQSSTAALL 243
           ALDV+TQ  +L+  +R+ +++G  AVYVSHDLAV+  + D+++VL  GRI+E +S   L 
Sbjct: 214 ALDVSTQAHILQTLRRLCKEQGVAAVYVSHDLAVIKDLVDRVLVLYAGRIVEMASRERLF 273

Query: 244 KGPVDAYSRSLLAA 257
             P   Y+  LLAA
Sbjct: 274 ARPSHPYTLGLLAA 287



 Score =  187 bits (476), Expect = 9e-52
 Identities = 103/232 (44%), Positives = 147/232 (63%), Gaps = 1/232 (0%)

Query: 299 VLEDIDLTIRRGQAIGVIGESGSGKSTLARVVAGLLDPAHGSLTFDGADLSGTLAGRTEE 358
           VL D+ L ++ G+ + V+GESGSGK++LAR +AGL D A G L FDG  LS     R   
Sbjct: 385 VLFDLALDVQAGECLAVVGESGSGKTSLARTLAGLGDNATGELRFDGQALSLLARQRPSA 444

Query: 359 QFRRIQMVFQNADTALNPMHSISAILARPLKMYFGLKGRALRERIDELMDLVRLPRELAE 418
              RIQ +FQN   ALNP  ++   L  PL+ +F LKG+A R RI+  +  V LP  +A+
Sbjct: 445 TRHRIQYIFQNPYRALNPRQTVGQCLQAPLEHFFKLKGQACRARIEAALQRVALPVTVAD 504

Query: 419 RRPNELSGGQKQRVNLARALAAKPDLILCDEVTSALDTVVGACILELLGELRRKLGVSYL 478
           + P++LSGG++QRV +ARAL  +P +++CDEVTSALD  V A IL LL +L+ + G++ +
Sbjct: 505 KYPHQLSGGERQRVAIARALVCEPSVLICDEVTSALDVSVQAAILALLKQLQGE-GMTLV 563

Query: 479 FISHDISTVRALCDDIVVMYSGHKVEEGSREAFSRVPFHPYTDLLVHSVPEL 530
           F++HD+  VRA+ D +VV+  G  VE+G  +     P   YT  L+   P L
Sbjct: 564 FVTHDLGVVRAIADRVVVIKQGRIVEQGPVDQVLDRPVDRYTQSLLAHTPRL 615



 Score =  147 bits (370), Expect = 2e-39
 Identities = 107/309 (34%), Positives = 162/309 (52%), Gaps = 32/309 (10%)

Query: 299 VLEDIDLTIRRGQAIGVIGESGSGKSTLA-----------RVVAGLLDPAHGSLTFDGAD 347
           +++ I+ T+  G+ +G++GESGSGK+TLA           R+ AG +  A  SL      
Sbjct: 52  IIDHINFTLASGEILGLVGESGSGKTTLATALLAHARRGARIAAGHIQVADVSLL----- 106

Query: 348 LSGTLAGRTEEQFRR--IQMVFQNADTALNPMHSISAILARPLKMYFG-LKGRALRERID 404
               L G    Q R   I  V Q+   ALNP   I  +L   L  +   L   A ++R+ 
Sbjct: 107 ---ELHGEPLRQARGGLIGYVAQDPAQALNPALRIGPLLLETLHAHEPQLPKAAQQQRLQ 163

Query: 405 ELMDLVRLP--RELAERRPNELSGGQKQRVNLARALAAKPDLILCDEVTSALDTVVGACI 462
           + +  V LP   +  +R P++LSGGQ+QRV LA A   +P LI+ DE T+ALD    A I
Sbjct: 164 QTLLDVGLPGDAQFLQRFPHQLSGGQQQRVMLALAFVLRPRLIVLDEPTTALDVSTQAHI 223

Query: 463 LELLGELRRKLGVSYLFISHDISTVRALCDDIVVMYSGHKVEEGSREAFSRVPFHPYTDL 522
           L+ L  L ++ GV+ +++SHD++ ++ L D ++V+Y+G  VE  SRE     P HPYT  
Sbjct: 224 LQTLRRLCKEQGVAAVYVSHDLAVIKDLVDRVLVLYAGRIVEMASRERLFARPSHPYTLG 283

Query: 523 LVHSVPEL-RQGWLETCGVTSGNLPPISAPANNPELCTFLNRCPARIEGLCNKTAPGRRL 581
           L+ ++P++ RQ  L+      G+ P   AP   P  C F  RCP R    C +  PG + 
Sbjct: 284 LLAAIPDVARQHPLQ---AIPGHAP---APGQRPNGCAFAPRCPRR-TAACEQGEPGLQT 336

Query: 582 IAGGSEILC 590
           +    ++ C
Sbjct: 337 LEARQQVAC 345



 Score =  139 bits (351), Expect = 3e-37
 Identities = 91/231 (39%), Positives = 135/231 (58%), Gaps = 18/231 (7%)

Query: 31  LEKGEVLALIGESGSGKTTIALALLGYARRGCKLAGGVVQVGAHDMLSLPESQLQGLRGN 90
           ++ GE LA++GESGSGKT++A  L G        A G ++      LSL   Q      +
Sbjct: 393 VQAGECLAVVGESGSGKTSLARTLAGLGDN----ATGELRFDGQ-ALSLLARQRPSATRH 447

Query: 91  RVSYIAQSAAAAFNPAKKLIDQVIEGALIH-----GLGSRAELEAKAVELFRDLALPNPE 145
           R+ YI Q+   A NP ++ + Q ++  L H     G   RA +EA      + +ALP   
Sbjct: 448 RIQYIFQNPYRALNP-RQTVGQCLQAPLEHFFKLKGQACRARIEAA----LQRVALP--V 500

Query: 146 SIGRRYPHQVSGGQLQRVMAAMALISDPLLVILDEPTTALDVTTQIDVLRAFKRVVRDRG 205
           ++  +YPHQ+SGG+ QRV  A AL+ +P ++I DE T+ALDV+ Q  +L   K+ ++  G
Sbjct: 501 TVADKYPHQLSGGERQRVAIARALVCEPSVLICDEVTSALDVSVQAAILALLKQ-LQGEG 559

Query: 206 ATAVYVSHDLAVVAQMADQIVVLNGGRIIEQSSTAALLKGPVDAYSRSLLA 256
            T V+V+HDL VV  +AD++VV+  GRI+EQ     +L  PVD Y++SLLA
Sbjct: 560 MTLVFVTHDLGVVRAIADRVVVIKQGRIVEQGPVDQVLDRPVDRYTQSLLA 610