Pairwise Alignments

Query, 613 a.a., Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal from Pseudomonas syringae pv. syringae B728a

Subject, 558 a.a., ABC transporter ATP-binding protein from Serratia liquefaciens MT49

 Score =  347 bits (889), Expect = 1e-99
 Identities = 196/527 (37%), Positives = 303/527 (57%), Gaps = 4/527 (0%)

Query: 4   LIRVQDLRVVADGDHGELEIVKGVSFALEKGEVLALIGESGSGKTTIALALLGYARRGCK 63
           ++ ++ + +   G  G   +V  VSFA++ GEV+AL+GESGSGKTT A A++G      +
Sbjct: 16  VLELEQVSIAYQGAAGNQRVVHQVSFAIQPGEVVALVGESGSGKTTTAQAIIGLLTENGR 75

Query: 64  LAGGVVQVGAHDMLSLPESQLQGLRGNRVSYIAQSAAAAFNPAKKLIDQVIEGALIHGLG 123
           L  G +++   D+      +L  +RG ++S I Q  +++ NP K + DQV E   IH   
Sbjct: 76  LEQGAIRLNGTDISHWSSKRLDAVRGAQISLIPQDPSSSLNPVKTIGDQVAEIINIHRRL 135

Query: 124 SRAELEAKAVELFRDLALPNPESIGRRYPHQVSGGQLQRVMAAMALISDPLLVILDEPTT 183
            R +L+ + V L   + L +PE   R+YPH++SGG  QRV+ A+A+   P L+I DEPT+
Sbjct: 136 PRKQLQQRVVALLTRVGLTHPELRARQYPHELSGGMKQRVLIAIAIALQPALIIADEPTS 195

Query: 184 ALDVTTQIDVLRAFKRVVRDRGATAVYVSHDLAVVAQMADQIVVLNGGRIIEQSSTAALL 243
           ALDVT Q  +L     + ++ G   + V+HDLAV A+ AD+++V   GR+ EQ  TA +L
Sbjct: 196 ALDVTVQKRILDLIDELRQEFGTAVLLVTHDLAVAAERADRLLVFRHGRVQEQGVTAEVL 255

Query: 244 KGPVDAYSRSLLA-AARPDKVLSPASEVVKDSTLLTIKGLTAGYGKKNLQGMPMIRVLED 302
           + P   Y+R L A      + + P          + + GL   +      G    R L+ 
Sbjct: 256 RAPASDYTRRLFADVPSLSRAVVPQPGHRTQELAIQVNGLVKDFPLAG-SGGKTYRALDQ 314

Query: 303 IDLTIRRGQAIGVIGESGSGKSTLARVVAGLLDPAHGSLTFDGADLSGTLAGRTEEQF-R 361
           +  ++  G    ++GESGSGK+TLAR + G   P  G +  DG D +  L G    QF R
Sbjct: 315 VSFSVPGGTTHALVGESGSGKTTLARCLLGFQRPDAGQIIIDGVDFT-RLKGEALRQFRR 373

Query: 362 RIQMVFQNADTALNPMHSISAILARPLKMYFGLKGRALRERIDELMDLVRLPRELAERRP 421
           RIQ+V+QN   +L+P  ++  ++  PL  +  L       R+ +L + V LP EL  R+P
Sbjct: 374 RIQLVYQNPFGSLDPSQTLYQVIEEPLLNFEPLTQAERYRRVRDLFERVALPNELLSRKP 433

Query: 422 NELSGGQKQRVNLARALAAKPDLILCDEVTSALDTVVGACILELLGELRRKLGVSYLFIS 481
            ELSGGQ+QRV +ARAL  +P +++ DE TSALD  V A IL LL +L+++LG++YLFIS
Sbjct: 434 RELSGGQRQRVAIARALVLQPRVLVLDEATSALDVTVQAQILRLLQDLQQELGLTYLFIS 493

Query: 482 HDISTVRALCDDIVVMYSGHKVEEGSREAFSRVPFHPYTDLLVHSVP 528
           HD++TVR +   + V++ G +V+ G+ +    +P   YT  L+ ++P
Sbjct: 494 HDLATVRQISHSVSVLHRGVQVDSGATDELFVMPGSDYTRQLIEAIP 540



 Score =  136 bits (343), Expect = 2e-36
 Identities = 83/240 (34%), Positives = 135/240 (56%), Gaps = 7/240 (2%)

Query: 298 RVLEDIDLTIRRGQAIGVIGESGSGKSTLARVVAGLLDP----AHGSLTFDGADLSGTLA 353
           RV+  +   I+ G+ + ++GESGSGK+T A+ + GLL        G++  +G D+S   +
Sbjct: 34  RVVHQVSFAIQPGEVVALVGESGSGKTTTAQAIIGLLTENGRLEQGAIRLNGTDISHWSS 93

Query: 354 GRTEE-QFRRIQMVFQNADTALNPMHSISAILARPLKMYFGLKGRALRERIDELMDLVRL 412
            R +  +  +I ++ Q+  ++LNP+ +I   +A  + ++  L  + L++R+  L+  V L
Sbjct: 94  KRLDAVRGAQISLIPQDPSSSLNPVKTIGDQVAEIINIHRRLPRKQLQQRVVALLTRVGL 153

Query: 413 --PRELAERRPNELSGGQKQRVNLARALAAKPDLILCDEVTSALDTVVGACILELLGELR 470
             P   A + P+ELSGG KQRV +A A+A +P LI+ DE TSALD  V   IL+L+ ELR
Sbjct: 154 THPELRARQYPHELSGGMKQRVLIAIAIALQPALIIADEPTSALDVTVQKRILDLIDELR 213

Query: 471 RKLGVSYLFISHDISTVRALCDDIVVMYSGHKVEEGSREAFSRVPFHPYTDLLVHSVPEL 530
           ++ G + L ++HD++      D ++V   G   E+G      R P   YT  L   VP L
Sbjct: 214 QEFGTAVLLVTHDLAVAAERADRLLVFRHGRVQEQGVTAEVLRAPASDYTRRLFADVPSL 273