Pairwise Alignments

Query, 460 a.a., Multi antimicrobial extrusion protein MatE from Pseudomonas syringae pv. syringae B728a

Subject, 468 a.a., Na(+)/drug antiporter, MATE family of MDR efflux pumps from Pseudomonas sp. S08-1

 Score =  228 bits (582), Expect = 2e-64
 Identities = 150/457 (32%), Positives = 215/457 (47%), Gaps = 9/457 (1%)

Query: 6   LKELWIILRLAGPLIASQMAHMLMVFTDTVMMGKIGPEALAGGGLGAATYSFVSFFCVGV 65
           L E+  +L LA P+I +Q+AH  M F D VM G++    LA   LG + +  V     G 
Sbjct: 11  LAEIRALLALATPIIIAQLAHTSMGFVDAVMAGRVSARDLAAVALGNSLWVPVFLLMNGT 70

Query: 66  MAAVGTLVSIRHGAGDTEGATRLTQAGLWLAWGMALVAALLLWNLEPILLQFGQAEANVH 125
           + A    V+ R+GAG  E    L +  LWLA  + L  A LLWN EP+L   G       
Sbjct: 71  LLATTAKVAQRYGAGKQEEIGPLVRQALWLALAVGLGCATLLWNAEPLLHLMGVDAELSA 130

Query: 126 MAAQFLITLPFALPGLLSFMALRGFTSALGRAGPVMTISLAGAAANFVLNYALIHQWLGL 185
           MA  +L  +    P +  +  LR  +  +G   P M I + G   N  LNY LI+  LG 
Sbjct: 131 MAMGYLRGIACGFPAVALYHVLRCCSDGIGHTRPSMFIGIGGLLLNIPLNYILIYGHLGF 190

Query: 186 PNLGLMGIGLVTAIVTNCMALALALHIRLHPAYAAYPIRKGLSKLSRSHLGELWRLGLPI 245
           P +G +G G  +  V   M L +   +   P Y    + K       + +  L  +G+PI
Sbjct: 191 PAMGGVGCGWASGAVMWGMLLGMLWWVNHAPYYQPSRLFKHFEWPQWAVIRRLLSIGVPI 250

Query: 246 GGTYAVEVGLFTFAAFCMGAMGSTQMAAHQIALQTVSMAFMVPVGMSYAVTMRIGQHYGA 305
           G     E  +F+  A  +G +G+T +A HQIAL   SM FM+P  ++ A T+R+GQ  G 
Sbjct: 251 GVAIFAESSIFSVIALLIGGLGATVVAGHQIALNFSSMIFMIPYSLAMAATVRVGQSLGR 310

Query: 306 GNLLMVRMAGRLGIGFGGCVMLMFGLLFWLAPHLVIGLFLDINDPAFAEIVVLATKLLAI 365
           G     R +  + +G       +   L  L    +  ++    DP    ++ +A  LL  
Sbjct: 311 GTPRDARFSAGVAMGTALAYACLSATLVLLLREQIAAIYSP--DPT---VIAMAATLLVY 365

Query: 366 AALFEFFDGTQTIAMGAIRGLKDARTTFLIGLGCYWLIAAPAAWLLGFS----TDAGASG 421
           +ALF+F D  Q  A GA+RG +D R T LI L  YW I  P  + LG S      +G SG
Sbjct: 366 SALFQFSDAVQVTAAGALRGYQDTRATMLITLFAYWGIGLPVGYALGLSDWLGQPSGPSG 425

Query: 422 VWWGLALGLFCSAVALTYAFEWKTARLLRQDAAGLPV 458
           +W GL +GL C+AV L         R +   +A   V
Sbjct: 426 LWQGLVVGLTCAAVLLGIRLARSARRRIHAQSASATV 462