Pairwise Alignments

Query, 338 a.a., alginate regulatory protein AlgR3 from Pseudomonas syringae pv. syringae B728a

Subject, 380 a.a., hypothetical protein from Pseudomonas sp. RS175

 Score =  389 bits (1000), Expect = e-113
 Identities = 251/393 (63%), Positives = 264/393 (67%), Gaps = 68/393 (17%)

Query: 1   MSAKKKPVNTPLHLLQQLSGSLLEHLEDACSQALADAEKLLAKLEKQRGKAQEKLHNSRI 60
           MSA KKPVNTPLHLLQQLSGSLLEHLE+ACSQALADAEKLLAKLEKQRGKAQEKLH SR 
Sbjct: 1   MSAPKKPVNTPLHLLQQLSGSLLEHLENACSQALADAEKLLAKLEKQRGKAQEKLHKSRT 60

Query: 61  KLQDAATAGKSKAQAKAKGAVSELEELLDALKDRQTETRTYILHLKRDAQESLKLAQGIG 120
           KLQ+AATAGK+KAQAKAK AV ELE LLDALKDRQ+ETR YIL LKRDAQESLKLAQG+G
Sbjct: 61  KLQEAATAGKAKAQAKAKDAVKELESLLDALKDRQSETRAYILQLKRDAQESLKLAQGVG 120

Query: 121 RVKEAVGKILTTRDAKPVA---------------PKAVAKTPAAKAPAKTAAKAPVKTAA 165
           RV+EA GK LT R AKPVA               P  VA  PA KAPAK A+K   K AA
Sbjct: 121 RVQEAAGKALTLRAAKPVAVSAKKPAAKPAAAKTPAKVAAKPAVKAPAKAASKPAAKPAA 180

Query: 166 AKPVAKAAAKPSAAAKPAAKTA---VAKAPV----------------KAAAKPA------ 200
            KPVA +AAKP AA KPA K A   VAKAP                  AAAKPA      
Sbjct: 181 TKPVAASAAKP-AAKKPAVKAAAKPVAKAPAAKPAAAKPSAAKPVAKPAAAKPATSKTAA 239

Query: 201 --PRATAAAKPVAAKTTAAKPAAARTTAAKPAAAKPAATKAPVAKTTASNAAKPAAAKAA 258
             P A  AAKPVAAK TAAKPAA +T AAKPA+AKPAA KAP     A  AAKPAAAK A
Sbjct: 240 AKPAAKVAAKPVAAK-TAAKPAATKTAAAKPASAKPAAAKAP-----AKTAAKPAAAKPA 293

Query: 259 AAKAPVKAPVKAPAKAPAKAPVKAAAKPVAKPAAKPAV-KPAAAKPATPA---PAAAKP- 313
           A K   K     PA A      K AAKP AKPAAK AV KPAAAKPATP    PA A P 
Sbjct: 294 ATKTVAKPAAAKPAAA------KPAAKPAAKPAAKSAVKKPAAAKPATPTAAKPATAAPA 347

Query: 314 --TTPAPAAPAAAPA------TPANGATPTSAS 338
             +TPAP A   APA      T +  +TPTSAS
Sbjct: 348 PSSTPAPTASTPAPALNPSVTTTSGTSTPTSAS 380