Pairwise Alignments

Query, 376 a.a., Secretion protein HlyD from Synechococcus elongatus PCC 7942

Subject, 385 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  130 bits (328), Expect = 5e-35
 Identities = 91/341 (26%), Positives = 167/341 (48%), Gaps = 19/341 (5%)

Query: 42  LPVDVTKATVETVNDLTEYLGALEATEQTILRPQIQGRIVSVAVQPGQIVSVGQPMFVLD 101
           LP+ V     E      +YLG++E  E   +RPQ+ G +  + V  G  V  GQP+F ++
Sbjct: 40  LPLPVISLKEEKAARSYQYLGSIEGVENVEIRPQVDGILEQIYVDEGDFVEKGQPLFKIN 99

Query: 102 SEQVEADVAAANAEVARQEAQLRDAKITFERQKFLADQGVVPLQNLDNARRELQTAQAQL 161
           S+    D+  A A V  ++A+LR AK   +R + L D  V+    +     + + A++ L
Sbjct: 100 SQPYMEDLKNAQANVELEKAKLRKAKTEIDRLQPLIDNEVISEVRMQTTLADYEVAKSAL 159

Query: 162 KAAQQNAVAKSVNVQYKTVRAPINGLVGDIRLKIGDFV-DTGAE-LTTITRNNQLFINIP 219
           + A+  A    +N+++ T++AP+NG +G I   IG+ V  T +E LTT++  +++++   
Sbjct: 160 QQAEAVAANMRINLEFTTIKAPVNGFMGRIPRSIGNVVKKTDSEPLTTLSNVHEVYVYFS 219

Query: 220 VPT---VRIPQLRKGQPVKLLDPFSKNILA-------TGAVDFVSPVVQQNLQTVLVKVV 269
           +     +   +++K    K L+P  K ILA        G +D  S  + ++  ++ ++  
Sbjct: 220 MSESDYLYYERMKKDSSSKKLNPNVKLILADGSIYDKVGTIDANSGQINRSTGSIALRAR 279

Query: 270 VPNADGLIRNGQIVQSEIVWDRKEAVLVPTQAVTPLAGANFVYVVEPKPNSPDQFQVRQQ 329
             N D L+R+G   +  +     EA+L+P  A   +    FVY +       +   V ++
Sbjct: 280 FSNPDTLLRSGNTGKILMEQIYPEAILIPQGATASIHDKKFVYTLN------EDNTVNRK 333

Query: 330 KVELGSIFNNRYQIRSG-LKPGETVATTNLLSLTDKATVKP 369
           ++++       Y +  G L P + + T+ L  LTD   VKP
Sbjct: 334 EIKIEGRSGKEYIVSDGSLSPDDRIVTSGLDKLTDGVKVKP 374