Pairwise Alignments

Query, 280 a.a., diaminopimelate epimerase from Synechococcus elongatus PCC 7942

Subject, 274 a.a., diaminopimelate epimerase from Erwinia tracheiphila SCR3

 Score =  200 bits (508), Expect = 3e-56
 Identities = 108/278 (38%), Positives = 161/278 (57%), Gaps = 6/278 (2%)

Query: 3   LQFAKYHGLGNDFILVDNRESGEPRLTPEQAVQVCDRNFGVGADGVIFALPG-SGDSDYV 61
           +QF+K HGLGNDF++VD   +     +PE   ++ DR+ G+G D ++   P    D D+ 
Sbjct: 1   MQFSKMHGLGNDFMVVD-AVTQNVYFSPELIRRLADRHLGIGFDQLLIVEPPYDPDLDFH 59

Query: 62  MRIFNSDGSEPEMCGNGIRCLAKFLSELDGGAQSRYRIATGAGLIVPTLTETGLVTVDMG 121
            RIFN+DGSE   CGNG RC A+F+       +S   ++T  G +V ++TE  LV V+MG
Sbjct: 60  YRIFNADGSEVAQCGNGARCFARFVRLKGLTNKSDIHVSTHTGRMVLSVTEDELVCVNMG 119

Query: 122 PAYLKPVEIPTTLTGTGDRVVEADLEVGDRPWKVTTVSMGNPHCITFVEDVAAVPLAEIG 181
               +P ++P       +  +   +   ++      VSMGNPHC+  V+ V A  +  +G
Sbjct: 120 EPNFEPQQVPFRANKAENLYL---MRAAEQTVMCGVVSMGNPHCVLQVDSVQAAQVETLG 176

Query: 182 PLFEHHPVFPQRTNTEFVEVVRPDYLKMRVWERGAGATLACGTGACATLVAAVLTGRSDR 241
           P+ E H  FP+R N  F+EVV  +Y+++RV+ERGAG T ACG+GACA +   +   +   
Sbjct: 177 PVLESHERFPERVNVGFMEVVSREYIRLRVYERGAGETQACGSGACAAVAVGIQQAQLAE 236

Query: 242 QATVELPGGPLQIEWREDGH-LFMTGPAVKVFSGSMEL 278
           +  V+LPGG L I W+  G  L+MTGPA  V+ G + L
Sbjct: 237 KVRVDLPGGRLDIAWKGAGQPLYMTGPATHVYDGFIHL 274