Pairwise Alignments

Query, 280 a.a., diaminopimelate epimerase from Synechococcus elongatus PCC 7942

Subject, 274 a.a., diaminopimelate epimerase from Escherichia coli ECRC100

 Score =  204 bits (520), Expect = 1e-57
 Identities = 113/279 (40%), Positives = 164/279 (58%), Gaps = 8/279 (2%)

Query: 3   LQFAKYHGLGNDFILVDNRESGEPRLTPEQAVQVCDRNFGVGADGVIFALPG-SGDSDYV 61
           +QF+K HGLGNDF++VD   +     +PE   ++ DR+ GVG D ++   P    + D+ 
Sbjct: 1   MQFSKMHGLGNDFMVVD-AVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFH 59

Query: 62  MRIFNSDGSEPEMCGNGIRCLAKFLSELDGGAQSR-YRIATGAGLIVPTLTETGLVTVDM 120
            RIFN+DGSE   CGNG RC A+F+  L G    R  R++T  G +V T+T+  LV V+M
Sbjct: 60  YRIFNADGSEVAQCGNGARCFARFV-RLKGLTNKRDIRVSTANGRMVLTVTDDDLVRVNM 118

Query: 121 GPAYLKPVEIPTTLTGTGDRVVEADLEVGDRPWKVTTVSMGNPHCITFVEDVAAVPLAEI 180
           G    +P  +P          +   +   ++      VSMGNPHC+  V+DV    +  +
Sbjct: 119 GEPNFEPSAVPFRANKAEKTYI---MRAAEQTILCGVVSMGNPHCVIQVDDVDTAAVETL 175

Query: 181 GPLFEHHPVFPQRTNTEFVEVVRPDYLKMRVWERGAGATLACGTGACATLVAAVLTGRSD 240
           GP+ E H  FP+R N  F++VV+ +++++RV+ERGAG T ACG+GACA +   +  G   
Sbjct: 176 GPVLESHERFPERANIGFMQVVKREHIRLRVYERGAGETQACGSGACAAVAVGIQQGLLA 235

Query: 241 RQATVELPGGPLQIEWREDGH-LFMTGPAVKVFSGSMEL 278
            +  VELPGG L I W+  GH L+MTGPAV V+ G + L
Sbjct: 236 EEVRVELPGGRLDIAWKGPGHPLYMTGPAVHVYDGFIHL 274