Pairwise Alignments

Query, 483 a.a., transcriptional regulator, GntR family from Synechococcus elongatus PCC 7942

Subject, 473 a.a., transcriptional regulator, GntR family from Pseudomonas syringae pv. syringae B728a ΔmexB

 Score =  341 bits (875), Expect = 3e-98
 Identities = 190/473 (40%), Positives = 279/473 (58%), Gaps = 9/473 (1%)

Query: 13  TLYEAVADRIHRLILEGTLQPGDRLPSVRKLHRQWSISISTVLEAYRLLEDRGLIQARPQ 72
           TLY  +A+ +   I  G  +PGDRLPSVR L  +  +S+STV +AYR+LED GL   +P+
Sbjct: 2   TLYVNLAELLGSRIENGFYRPGDRLPSVRALSVEHGVSLSTVQQAYRVLEDHGLAAPKPK 61

Query: 73  SGYFVKSALHSLPEEPSFSPPTAVNHPVEISLAFRVSNAVCDSQ---TVGLGSAIAGTEL 129
           SGYFV S     P  P+   P  V  PV+IS   +V + +  +       LG  +     
Sbjct: 62  SGYFV-SVSRKAPALPAVGRP--VQRPVDISQWDQVLDLIRVAPLEAVTQLGRGMPDVTS 118

Query: 130 LPIATLNRLMGQVLRTQPAAAHCYGSPQGCEELRHEVARRLLDAGCSATPDQIVITNGTT 189
             +  L R + Q+ R Q      Y +  G   LR ++AR +LD+GCS T + +++TNG  
Sbjct: 119 PTLKPLMRALSQLSRHQDMPGLYYDNIYGVRRLREQIARLMLDSGCSLTANDLIVTNGCH 178

Query: 190 EALYLSLKAITKPGDTVAIESPTYHLLLETLSALHLKALELPTHPQEGISLEHLEEALKT 249
           EAL  S++AI  PGD VA++SP++   ++TL  + +KA+E+PT P  GISLE LE AL+ 
Sbjct: 179 EALSASVRAICSPGDIVAVDSPSFFGAMQTLKGVGMKAMEIPTDPLTGISLEALELALEQ 238

Query: 250 RKVVACVLITNFSNPLGSCMSDSKKKQIIDLLNHCDIPLIEDDIYGELHFEGSRPKAIKA 309
             +    L  N +NPLG  M +++K+ ++ L    D+ +IEDD+YG+L +   RP+ IK+
Sbjct: 239 WPIKVIQLTPNCNNPLGYVMPEARKRALLTLAQRFDVAIIEDDVYGDLAYNYPRPRTIKS 298

Query: 310 LDQDGRVLYCASVSKTLSPGLRVGWVVAGRYQLKVEQLKMTMNYMSAIAPQLTTAAFLAN 369
            D+DGRVL C+S SKTL+PGLR+GWV  GRY  +V  +K      +A  PQL  A F+  
Sbjct: 299 FDEDGRVLLCSSFSKTLAPGLRIGWVAPGRYLEQVLHMKYIGTGSTAPQPQLAIADFIEG 358

Query: 370 GGYDRHLRRLRQAHHSQMQSMTQAICDYFPAITKVSRPKGGYVLWIEMPPHVDTLQLYEV 429
           G Y+ H+RR+R  +      M   +  YFP  T+ SRP+GG++LW+E+    DTL+L   
Sbjct: 359 GHYEPHVRRMRSQYQRSRDQMIDWVMRYFPEGTRASRPQGGFMLWVELAEGFDTLRLNRA 418

Query: 430 ARQRQIIIAPGVMFSPSGNYRHCFRLNFGLPFTEAIHQALQTLGQ---LLHAQ 479
              + + IA G +FS SG YR+C R+NF    +  I  A++ +G+   LL+AQ
Sbjct: 419 LLGKGVQIAVGSIFSASGKYRNCMRMNFATKPSREIESAVRIVGETIALLNAQ 471