Pairwise Alignments

Query, 483 a.a., transcriptional regulator, GntR family from Synechococcus elongatus PCC 7942

Subject, 496 a.a., putative regulator from Pseudomonas putida KT2440

 Score =  354 bits (909), Expect = e-102
 Identities = 192/465 (41%), Positives = 281/465 (60%), Gaps = 6/465 (1%)

Query: 13  TLYEAVADRIHRLILEGTLQPGDRLPSVRKLHRQWSISISTVLEAYRLLEDRGLIQARPQ 72
           TLY  +A+ +   I +G  +PG RLPSVR L  +  +S+STV +AYR+LED G++  RP+
Sbjct: 22  TLYLNLAEILGARIKQGLYRPGQRLPSVRALSEEHGVSLSTVQQAYRMLEDSGMVSPRPK 81

Query: 73  SGYFVKSALHSLPEEPSFSPPTAVNHPVEISLAFRVSNAVCDS---QTVGLGSAIAGTEL 129
           SGYFV S    LP  P+ S P     PV+IS   +V   V  +     V LG  +   + 
Sbjct: 82  SGYFV-SDQRQLPALPAVSRPA--QRPVDISQWEQVLELVRSTPRQDVVQLGRGMPDIDS 138

Query: 130 LPIATLNRLMGQVLRTQPAAAHCYGSPQGCEELRHEVARRLLDAGCSATPDQIVITNGTT 189
             +  L R + Q+ R Q      Y +  G   LR +VAR +LD+GC   P  +VIT G  
Sbjct: 139 PTLKPLLRSLAQLSRRQDMPGLYYDNIHGNLALREQVARLMLDSGCRLGPADLVITTGCH 198

Query: 190 EALYLSLKAITKPGDTVAIESPTYHLLLETLSALHLKALELPTHPQEGISLEHLEEALKT 249
           EAL  S++A+ +PGD VA++SP++H  ++TL  L +KALE+PT P  GISLE LE AL+ 
Sbjct: 199 EALSCSIRAVCEPGDIVAVDSPSFHGAMQTLKGLGMKALEIPTDPVTGISLEALELALEQ 258

Query: 250 RKVVACVLITNFSNPLGSCMSDSKKKQIIDLLNHCDIPLIEDDIYGELHFEGSRPKAIKA 309
             +    +  + +NPLG  M +++KK ++ L    D+ ++EDD+YG+L +   RP+ +K+
Sbjct: 259 WPIKLIQITPSCNNPLGYIMPEARKKALLSLAQRYDVAILEDDVYGDLAYTYPRPRTLKS 318

Query: 310 LDQDGRVLYCASVSKTLSPGLRVGWVVAGRYQLKVEQLKMTMNYMSAIAPQLTTAAFLAN 369
            D DGRVL C+S SKTL+PGLR+GWV  GRY  +V  +K      +A  PQL  A F+A 
Sbjct: 319 FDDDGRVLLCSSFSKTLAPGLRIGWVAPGRYLERVLHMKYISTGSTASQPQLAIADFIAA 378

Query: 370 GGYDRHLRRLRQAHHSQMQSMTQAICDYFPAITKVSRPKGGYVLWIEMPPHVDTLQLYEV 429
           G Y  H+RR+R  +      M   +  YFPA T+VSRP+GG++LW+E+P H+DTL+L   
Sbjct: 379 GHYQPHVRRMRSQYQRGRDLMGDWVTRYFPAGTRVSRPQGGFMLWVELPEHLDTLRLNRA 438

Query: 430 ARQRQIIIAPGVMFSPSGNYRHCFRLNFGLPFTEAIHQALQTLGQ 474
             ++ + +A G +FS SG +RHC R+NF    T  I  +++ +G+
Sbjct: 439 LLEQGVQVAVGSIFSASGKFRHCLRMNFAARPTPQIEASVRKVGE 483