Pairwise Alignments

Query, 483 a.a., transcriptional regulator, GntR family from Synechococcus elongatus PCC 7942

Subject, 477 a.a., HTH-type transcriptional regulator NorG from Pseudomonas sp. RS175

 Score =  340 bits (872), Expect = 6e-98
 Identities = 190/474 (40%), Positives = 275/474 (58%), Gaps = 6/474 (1%)

Query: 13  TLYEAVADRIHRLILEGTLQPGDRLPSVRKLHRQWSISISTVLEAYRLLEDRGLIQARPQ 72
           TLY  +A+ +   I +G  +PGDRLPSVR L  +  +S+STV +AYR+LED GL   +P+
Sbjct: 2   TLYVNLAELLGTRIEQGFYRPGDRLPSVRALSVEHGVSLSTVQQAYRVLEDSGLAMPKPK 61

Query: 73  SGYFVKSALHSLPEEPSFSPPTAVNHPVEISL---AFRVSNAVCDSQTVGLGSAIAGTEL 129
           SGYFV  +   LPE P+   P     PV+IS       +  AV     V LG  +     
Sbjct: 62  SGYFVPVS-RELPELPAVGRPA--QRPVDISQWDQVLELIRAVPRKDVVQLGRGMPDIHS 118

Query: 130 LPIATLNRLMGQVLRTQPAAAHCYGSPQGCEELRHEVARRLLDAGCSATPDQIVITNGTT 189
             +  L R + Q+ R Q      Y +  G   LR ++AR LL  GC+     +++T G  
Sbjct: 119 PTMKPLLRSLAQISRRQDMPGLYYDNIYGNLALREQIARLLLACGCTLGAGDLIVTTGCH 178

Query: 190 EALYLSLKAITKPGDTVAIESPTYHLLLETLSALHLKALELPTHPQEGISLEHLEEALKT 249
           EAL +S++A  + GD VA++SP++H  ++TL  L +KALE+PT P  GISL+ LE AL+ 
Sbjct: 179 EALSVSIRATCEQGDIVAVDSPSFHGAMQTLKGLGMKALEIPTDPLTGISLDALELALEQ 238

Query: 250 RKVVACVLITNFSNPLGSCMSDSKKKQIIDLLNHCDIPLIEDDIYGELHFEGSRPKAIKA 309
             + A  L  + +NPLG  M D+ K+ ++ L    D+ +IEDD+YGEL +   RP+ IK+
Sbjct: 239 WPIKAIQLTPSCNNPLGYIMPDANKRALLTLAQRFDVAIIEDDVYGELAYTYPRPRTIKS 298

Query: 310 LDQDGRVLYCASVSKTLSPGLRVGWVVAGRYQLKVEQLKMTMNYMSAIAPQLTTAAFLAN 369
            D+DGRVL C+S SKTL+PGLRVGWV  GRY  +V  +K      +A  PQ+  A FL  
Sbjct: 299 FDEDGRVLLCSSFSKTLAPGLRVGWVAPGRYLERVLHMKYISTGSTAPQPQIAIAEFLKA 358

Query: 370 GGYDRHLRRLRQAHHSQMQSMTQAICDYFPAITKVSRPKGGYVLWIEMPPHVDTLQLYEV 429
           G ++ HLRR+R  +      M   +  YFP  T+ SRP+G ++LW+E+P   DTL+L  V
Sbjct: 359 GHFEPHLRRMRTQYQRNRDVMIDWVSRYFPPGTRASRPRGSFMLWVELPEGFDTLKLNRV 418

Query: 430 ARQRQIIIAPGVMFSPSGNYRHCFRLNFGLPFTEAIHQALQTLGQLLHAQIQSS 483
              + + +A G +FS SG YR+C R+N+    T  I +A++ +G    A +  S
Sbjct: 419 LNDQGVQVAVGSIFSASGKYRNCLRMNYAAKPTAQIEEAVRRVGAAAIALLNES 472