Pairwise Alignments

Query, 483 a.a., transcriptional regulator, GntR family from Synechococcus elongatus PCC 7942

Subject, 473 a.a., HTH-type transcriptional regulator NorG from Pseudomonas sp. DMC3

 Score =  350 bits (899), Expect = e-101
 Identities = 193/464 (41%), Positives = 276/464 (59%), Gaps = 6/464 (1%)

Query: 13  TLYEAVADRIHRLILEGTLQPGDRLPSVRKLHRQWSISISTVLEAYRLLEDRGLIQARPQ 72
           TLY  +A+ +   I +G  +PGDRLPSVR L  +  +S+STV +AYR+LED GL   +P+
Sbjct: 2   TLYVNLAELLGTRIEQGFYRPGDRLPSVRALSVEHGVSLSTVQQAYRVLEDSGLATPKPK 61

Query: 73  SGYFVKSALHSLPEEPSFSPPTAVNHPVEISL---AFRVSNAVCDSQTVGLGSAIAGTEL 129
           SGYFV      LPE P+   P     PVEIS       +  AV     V LG  +     
Sbjct: 62  SGYFVPVG-RELPELPAVGRPA--QRPVEISQWDQVLELIRAVPRKDVVQLGRGMPDVGS 118

Query: 130 LPIATLNRLMGQVLRTQPAAAHCYGSPQGCEELRHEVARRLLDAGCSATPDQIVITNGTT 189
             +  L R + ++ R Q      Y +  G  ELR ++AR +LD+GC  +   +VIT G  
Sbjct: 119 PTMKPLLRGLARISRRQDMPGLYYDNIHGNLELREQIARLMLDSGCQLSASDLVITTGCH 178

Query: 190 EALYLSLKAITKPGDTVAIESPTYHLLLETLSALHLKALELPTHPQEGISLEHLEEALKT 249
           EAL  S+ AI +PGD VA++SP++H  ++TL  L +KALE+PT P  GISL+ LE AL+ 
Sbjct: 179 EALSTSIHAICEPGDIVAVDSPSFHGAMQTLKGLGMKALEIPTDPLTGISLDALELALEQ 238

Query: 250 RKVVACVLITNFSNPLGSCMSDSKKKQIIDLLNHCDIPLIEDDIYGELHFEGSRPKAIKA 309
             + A  L  N +NPLG  M +S+K+ ++ L    D+ +IEDD+YGEL +   RP+ IK+
Sbjct: 239 WPIKAIQLTPNCNNPLGYVMPESRKRALLTLAQRFDVAIIEDDVYGELAYTYPRPRTIKS 298

Query: 310 LDQDGRVLYCASVSKTLSPGLRVGWVVAGRYQLKVEQLKMTMNYMSAIAPQLTTAAFLAN 369
            D+DGRVL C+S SKTL+PGLR+GWV  GRY  +V  +K      +A  PQ+  A F+  
Sbjct: 299 FDEDGRVLLCSSFSKTLAPGLRIGWVAPGRYLERVLHMKYISTGSTAPQPQIAIAEFIKA 358

Query: 370 GGYDRHLRRLRQAHHSQMQSMTQAICDYFPAITKVSRPKGGYVLWIEMPPHVDTLQLYEV 429
           G ++ HLRR+R  +     +M   +  YFPA T+ SRP+G ++LW+E+P   DTL+L   
Sbjct: 359 GHFEPHLRRMRMQYQRNRDAMIDWVTRYFPAGTRASRPQGSFMLWVELPEGFDTLKLNRA 418

Query: 430 ARQRQIIIAPGVMFSPSGNYRHCFRLNFGLPFTEAIHQALQTLG 473
              + + IA G +FS SG YR+C R+N+    T  I +A++ +G
Sbjct: 419 LHDQGVQIAVGSIFSASGKYRNCLRMNYAAKPTAQIEEAVRKVG 462