Pairwise Alignments

Query, 659 a.a., nitrate transport ATP-binding subunits C and D from Synechococcus elongatus PCC 7942

Subject, 271 a.a., Aliphatic sulfonates import ATP-binding protein SsuB from Xanthobacter sp. DMC5

 Score =  204 bits (520), Expect = 3e-57
 Identities = 120/251 (47%), Positives = 157/251 (62%), Gaps = 10/251 (3%)

Query: 5   LAVDHVHQVFDLPGGGQYIALKDVSLNIRPGEFISLIGHSGCGKSTLLNLIAGLAQPSSG 64
           L + HV + F + G    + L D+SL++  G F+S++G SGCGKSTLL LI GL    +G
Sbjct: 20  LDIRHVSKAFVVDGKAVEV-LADISLSVEAGSFVSIVGASGCGKSTLLRLILGLDLDYAG 78

Query: 65  GIILEGRQVTEPGPDRMVVFQNYSLLPWRTVRQNIALAVDSVLHDR-NRTERRTIIEETI 123
            I L+GR V  PGP+R +VFQ + LLPW TV  N+  A+   LH   +   RR  + E +
Sbjct: 79  EIHLDGRPVEGPGPERSIVFQEHRLLPWLTVEGNVGAAL---LHSGLDAAARRRSVAEHL 135

Query: 124 DLVGLRAAADKYPHEISGGMKQRVAIARGLAIRPKLLLLDEPFGALDALTRGNLQEQLMR 183
           +LVGL A A  YP ++SGGM QRVAIAR LA RP+ LLLDEP GALDALTR  LQ +L R
Sbjct: 136 ELVGLEAFAKAYPAQLSGGMAQRVAIARALANRPRFLLLDEPLGALDALTRLRLQGELKR 195

Query: 184 ICQEAGVTAVMVTHDVDEALLLSDRVVMLTNGPAAQIGQILEVDFPRPRQRLEMMETPHY 243
           I    G TAV+VTHDVDEA+ L  R+V+L   P  +I  +LEV    P +      +P +
Sbjct: 196 IVAHEGATAVLVTHDVDEAVFLGHRIVVLHPRP-GRIAAVLEV----PEEARADRSSPAF 250

Query: 244 YDLRNELINFL 254
             LR+ ++  L
Sbjct: 251 VALRDRVLELL 261