Pairwise Alignments

Query, 659 a.a., nitrate transport ATP-binding subunits C and D from Synechococcus elongatus PCC 7942

Subject, 275 a.a., Bicarbonate transport ATP-binding protein CmpD from Xanthobacter sp. DMC5

 Score =  213 bits (541), Expect = 1e-59
 Identities = 117/259 (45%), Positives = 174/259 (67%), Gaps = 12/259 (4%)

Query: 5   LAVDHVHQVFDLPGGGQYIALKDVSLNIRPGEFISLIGHSGCGKSTLLNLIAGLA---QP 61
           L + H+++ F   G  Q   L+D++L++   EF+S++G SGCGKSTLL+++AGL     P
Sbjct: 15  LEIRHLNKSFGT-GAQQIEILRDINLDLAANEFVSVVGTSGCGKSTLLSIVAGLETFDDP 73

Query: 62  SSGG----IILEGRQVTEPGPDRMVVFQNYSLLPWRTVRQNIALAVDSVLHDRNRTERRT 117
           S G     + ++G  V + G DR VVFQ+Y+LLPW T +QN+  A+ +        ERR 
Sbjct: 74  SGGRDYSPVRIDGAPVFDAGLDRGVVFQSYTLLPWLTAQQNVEFALQAA--GMEAAERRR 131

Query: 118 IIEETIDLVGLRAAADKYPHEISGGMKQRVAIARGLAIRPKLLLLDEPFGALDALTRGNL 177
           + EE I LV L   A+ YP E+SGGMKQRVAIAR L+ RPK+LL+DEPFGALDALTR  +
Sbjct: 132 VAEEHIALVKLERFANAYPSELSGGMKQRVAIARALSYRPKMLLMDEPFGALDALTRQQM 191

Query: 178 QEQLMRICQEAGVTAVMVTHDVDEALLLSDRVVMLTNGPAAQIGQILEVDFPRPRQRLEM 237
           QE LM++ ++  +T + VTHDV+EA+ LSDR+V++  GP  ++ +   VD PRPR   E+
Sbjct: 192 QELLMQVWEQHRLTVLFVTHDVEEAVYLSDRIVVMGIGP-GRVRETFRVDLPRPRTS-EI 249

Query: 238 METPHYYDLRNELINFLQQ 256
           +ET  +  L+++++  +++
Sbjct: 250 VETEEFLALQHKVLKAIRE 268