Pairwise Alignments

Query, 659 a.a., nitrate transport ATP-binding subunits C and D from Synechococcus elongatus PCC 7942

Subject, 285 a.a., Bicarbonate transport ATP-binding protein CmpD from Xanthobacter sp. DMC5

 Score =  214 bits (546), Expect = 3e-60
 Identities = 110/228 (48%), Positives = 158/228 (69%), Gaps = 4/228 (1%)

Query: 5   LAVDHVHQVFDLPGGGQYIALKDVSLNIRPGEFISLIGHSGCGKSTLLNLIAGLAQPSSG 64
           + V  V + F +PGG + +ALKD+ L I  GEF+ L+G SGCGKSTLLN IAG + P++G
Sbjct: 26  IVVSDVDKRFVIPGG-EIVALKDIDLTINEGEFVCLLGPSGCGKSTLLNAIAGFSAPTTG 84

Query: 65  GIILEGRQVTEPGPDRMVVFQNYSLLPWRTVRQNIALAVDSVLHDRNRTERRTIIEETID 124
            I ++GR V +PGPDR +VFQ Y+L PW TV QNIA  ++  +   +R +    + E + 
Sbjct: 85  TITVDGRAVKDPGPDRGMVFQEYALFPWMTVAQNIAFGLE--IKGMSRAQIEPKVNELLA 142

Query: 125 LVGLRAAADKYPHEISGGMKQRVAIARGLAIRPKLLLLDEPFGALDALTRGNLQEQLMRI 184
           ++ L    D++P ++SGGM+QRVAIAR LA+   ++L+DEPFGALDALTR +LQ++L+RI
Sbjct: 143 MLKLAEFRDRFPKDLSGGMRQRVAIARVLALDSPVMLMDEPFGALDALTRRSLQDELIRI 202

Query: 185 CQEAGVTAVMVTHDVDEALLLSDRVVMLTNGPAAQIGQILEVDFPRPR 232
               G T V VTH ++E++ L+DR+V+LT  P   I + + V+ PRPR
Sbjct: 203 WSATGKTIVFVTHSIEESIYLADRIVVLTYRPGT-IKRDIRVELPRPR 249