Pairwise Alignments

Query, 659 a.a., nitrate transport ATP-binding subunits C and D from Synechococcus elongatus PCC 7942

Subject, 277 a.a., Nitrate import ATP-binding protein NrtD from Xanthobacter sp. DMC5

 Score =  191 bits (484), Expect = 5e-53
 Identities = 104/257 (40%), Positives = 161/257 (62%), Gaps = 8/257 (3%)

Query: 1   MSVFLAVDHVHQVFDLPGGGQYIALKDVSLNIRPGEFISLIGHSGCGKSTLLNLIAGLAQ 60
           M   +AV+H+   +   G G   AL DV+  +  G F+ L+G SGCGKS++L ++AGL Q
Sbjct: 27  MPADVAVEHITHTY---GAGGVKALDDVNFTVERGRFVGLVGPSGCGKSSMLLMLAGLMQ 83

Query: 61  PSSGGIILEGRQVTEPGPDRM-VVFQNYSLLPWRTVRQNIALAVDSVLHDRNRTERRTII 119
           PS G I++EG  +++P P+R+ VVFQ  SLLPW+T R+N+   +   +    + ERR   
Sbjct: 84  PSEGRILVEGTLLSKPDPERVGVVFQEASLLPWKTARENVEFPLK--VRGIGKAERRARA 141

Query: 120 EETIDLVGLRAAADKYPHEISGGMKQRVAIARGLAIRPKLLLLDEPFGALDALTRGNLQE 179
           +  +DLVGL    D+ P+++SGGM+ RV+IARG    P +LL+DEPF ALD  TR  +  
Sbjct: 142 DAFLDLVGLAEFKDRLPNQLSGGMRHRVSIARGFCQDPHILLMDEPFAALDEQTRMTMGN 201

Query: 180 QLMRICQEAGVTAVMVTHDVDEALLLSDRVVMLTNGPAAQIGQILEVDFPRPRQRLEMME 239
           +L+ I ++   T + VTH + EA+ L D VV++++ P  +I + +E+D PRPR   EMM 
Sbjct: 202 ELLNIWEKRRKTVIFVTHSLTEAVYLCDEVVVMSHRP-GRILERVEIDLPRPR-TYEMMA 259

Query: 240 TPHYYDLRNELINFLQQ 256
           T  +  LR+ +   +++
Sbjct: 260 TEKFGRLRDHIWRLIRK 276