Pairwise Alignments

Query, 659 a.a., nitrate transport ATP-binding subunits C and D from Synechococcus elongatus PCC 7942

Subject, 408 a.a., Nitrate-binding regulatory protein (nasS) (from data) from Pseudomonas simiae WCS417

 Score =  189 bits (480), Expect = 2e-52
 Identities = 124/378 (32%), Positives = 191/378 (50%), Gaps = 8/378 (2%)

Query: 275 ASQQKTVRLGFLPGNDCAPLAIAQELGLFQDLGLSVELQSFLTWEALEDSIRLGQLEGAL 334
           A ++ ++ LGF+  +DCA + +A   G  Q  GL++ L+   +W  L D +  G+L+ A 
Sbjct: 22  APEKSSLDLGFMALSDCASMVVAATQGFAQPYGLTLNLKRQTSWANLRDKLVSGELDAAH 81

Query: 335 MMAAQPLAMTMGLGGHRPFAIATPLTVSRNGGAIALSRRYLNAGVRSLEDLCQFLAATPQ 394
            +     A+ +G+GG  P  +A  + +++NG +I LSR     GV + E L + +  +  
Sbjct: 82  SLYGLIYAVHLGIGGVAPTDMAVLMGLNQNGQSINLSRGLQQQGVITPEALDRHVHQSRT 141

Query: 395 RLRLAIPDPIAMPALLLRYWLASAGLNPEQDVELVGMSPYEMVEALKAGDIDGFAAGEMR 454
           +L  A   P    A+ L YWLAS G++P QDV+ V + P +MV  L+AG IDGF  GE  
Sbjct: 142 KLTFAQTFPTGTHAMWLYYWLASQGIHPLQDVDSVVVPPPQMVAHLQAGRIDGFCVGEPW 201

Query: 455 IALAVQAGAAYVLATDLDIWAGHPEKVLGLPEAWLQVNPETAIALCSALLKAGELCDDPR 514
            A AV+    + LAT   IW  HPEKVLG  +A++   P TA  L  A+L+A    ++  
Sbjct: 202 CASAVKQNQGFTLATTQAIWPDHPEKVLGCTQAFVDQYPNTARVLVMAILEASRFIEESS 261

Query: 515 QRDR-IVEVLQQPQYLGSAAGTVLQRY---FDFGLGD--EPTQILRFNQFHVDQANYPNP 568
           +  R   ++L   +YL +    +  R    +D GLG+  +    LRF  F   + N P  
Sbjct: 262 ENRRSTAQLLSGREYLDAPLDCIEPRLLGTYDDGLGNHWQDPHALRF--FADGEVNLPYL 319

Query: 569 LEGTWLLTQLCRWGLTPLPKNRQELLDRVYRRDIYEAAIAAVGFPLITPSQRGFELFDAV 628
            +G W +TQ  RWGL     +   +  +V +  +Y  A AA+G     P  R  +L D  
Sbjct: 320 SDGMWFMTQFRRWGLLREDPDYLGVARQVQQLPLYRQAAAALGIATKHPDMRSSQLIDGK 379

Query: 629 PFDPDSPLRYLEQFEIKA 646
            +D   P  Y   F + A
Sbjct: 380 VWDGSDPADYARSFRLHA 397