Pairwise Alignments

Query, 659 a.a., nitrate transport ATP-binding subunits C and D from Synechococcus elongatus PCC 7942

Subject, 290 a.a., ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) from Variovorax sp. SCN45

 Score =  204 bits (519), Expect = 4e-57
 Identities = 107/233 (45%), Positives = 154/233 (66%), Gaps = 7/233 (3%)

Query: 19  GGQYIALKDVSLNIRPGEFISLIGHSGCGKSTLLNLIAGLAQPSSGGIILEGRQVTEPGP 78
           GG+   L+ + L++  G F+S++G SGCGKSTLL LI GL     G I+L G+ ++  G 
Sbjct: 29  GGELQVLEGIDLHVPEGRFVSIVGASGCGKSTLLRLILGLDTQYEGQILLGGQPISGTGR 88

Query: 79  DRMVVFQNYSLLPWRTVRQNIALAVDSVLHDRNRTERRTIIEETIDLVGLRAAADKYPHE 138
           +R +VFQ++ L PW TV QNIA+ + +  +     E+  ++ E + LVGL      +PH+
Sbjct: 89  ERGIVFQDHRLFPWLTVAQNIAVGLRNAPYTTR--EKAELVAEHVALVGLEGFERSWPHQ 146

Query: 139 ISGGMKQRVAIARGLAIRPKLLLLDEPFGALDALTRGNLQEQLMRICQEAGVTAVMVTHD 198
           ISGGM QRVAIARGL  RP++LLLDEPFGALDALTR  LQ +L RI Q+  +T ++VTHD
Sbjct: 147 ISGGMAQRVAIARGLVNRPRVLLLDEPFGALDALTRSRLQNELQRIWQKERITMLLVTHD 206

Query: 199 VDEALLLSDRVVMLTNGPAAQIGQILEVDFPRPRQRLEMMETPHYYDLRNELI 251
           V+EA+ L DRVV++   P  +I + + +D P PR R +    P +  LR++++
Sbjct: 207 VEEAVFLGDRVVVMQPSP-GRIRRTVNIDLPHPRNRSD----PEFIRLRDDVL 254