Pairwise Alignments

Query, 659 a.a., nitrate transport ATP-binding subunits C and D from Synechococcus elongatus PCC 7942

Subject, 260 a.a., Histidine ABC transporter, ATP-binding protein from Variovorax sp. SCN45

 Score =  189 bits (481), Expect = 1e-52
 Identities = 106/258 (41%), Positives = 161/258 (62%), Gaps = 8/258 (3%)

Query: 5   LAVDHVHQVFDLPGGGQYIALKDVSLNIRPGEFISLIGHSGCGKSTLLNLIAGLAQPSSG 64
           L++  V +VF    G +  AL+ +   ++  +F++++G SGCGKSTLL ++AGL  P++G
Sbjct: 5   LSIQGVSRVFTGAKGQRTQALQPIDFEVKENDFVTILGPSGCGKSTLLRIVAGLDFPTTG 64

Query: 65  GIILEGRQVTEPGPDRMVVFQNYSLLPWRTVRQNIALAVDSVLHDRNRTE--RRTIIEET 122
            ++L+GR++  PG DR VVFQ+Y+L PW TV QNI       L +R  +E  ++   E  
Sbjct: 65  QVLLDGRRIEGPGADRGVVFQSYTLFPWLTVAQNIRFG----LRERGMSEADQKERSEFF 120

Query: 123 IDLVGLRAAADKYPHEISGGMKQRVAIARGLAIRPKLLLLDEPFGALDALTRGNLQEQLM 182
           I  VGLR     +P ++SGGM+QR AIAR LA  PK+LLLDEPFGALD  TR  +QE L+
Sbjct: 121 IAKVGLRGFEHHFPKQLSGGMQQRTAIARALANDPKMLLLDEPFGALDNQTRVLMQELLL 180

Query: 183 RICQEAGVTAVMVTHDVDEALLLSDRVVMLTNGPAAQIGQILEVDFPRPRQRLEMMETPH 242
            I + A  T + VTHD+DEA+ +++RV + +  P  +I   + VDFP PR    +  +P 
Sbjct: 181 GIWESAQKTVLFVTHDIDEAIFMANRVAVFSARP-GRIKTEIAVDFPHPRS-YTIKTSPE 238

Query: 243 YYDLRNELINFLQQQRRA 260
           + +++  L   ++ +  A
Sbjct: 239 FMEIKARLTEEIRAESMA 256