Pairwise Alignments

Query, 659 a.a., nitrate transport ATP-binding subunits C and D from Synechococcus elongatus PCC 7942

Subject, 470 a.a., nitrate ABC transporter substrate-binding protein from Magnetospirillum magneticum AMB-1

 Score =  175 bits (444), Expect = 4e-48
 Identities = 129/429 (30%), Positives = 200/429 (46%), Gaps = 54/429 (12%)

Query: 267 AAPAPAVAAS---QQKTVRLGFLPGNDCAPLAIAQELGLFQDLGLSVELQSFLTWEALED 323
           A P  A AA    ++  ++LGF+   D APLAIA+E G F+D GL V L+    W+ L D
Sbjct: 29  ALPHGAEAAKLKLEKDELKLGFIKLTDMAPLAIAKEKGFFEDEGLFVTLEPQANWKVLLD 88

Query: 324 SIRLGQLEGALMMAAQPLAMTMGLGGHRPFAIATPLTVSRNGGAIALSRRYLNA------ 377
            +  G+L+GA M+A QP+  T+G G      + T  ++  NG  I +S     A      
Sbjct: 89  RVISGELDGAHMLAGQPIGATIGYGTQA--HVVTAFSMDLNGNGITVSNEVWEAMKPHLP 146

Query: 378 -----------GVRSLEDLCQFLAATPQRLRLAIPDPIAMPALLLRYWLASAGLNP---- 422
                         +L+ +   + A  +   + +  P++     LRYWLAS G+NP    
Sbjct: 147 KGPDGKIAHPIKADALKKVVDAMKAQGKSFNMGMVFPVSTHNYELRYWLASGGINPGYYS 206

Query: 423 --------EQDVELVGMSPYEMVEALKAGDIDGFAAGEMRIALAVQAGAAYVLATDLDIW 474
                     D  L    P +M   L+AG I G++ GE     AV  G    + TD +IW
Sbjct: 207 PDNVSGQIAADALLSVTPPPQMPATLEAGTISGYSVGEPWNQAAVFKGIGVPVITDYEIW 266

Query: 475 AGHPEKVLGLPEAWLQVNPETAIALCSALLKAGELCDDPR--QRDRIVEVLQQPQYLGSA 532
             +PEKV G+  AW +  P T +A+  AL++AG+  D+     RD  V++L + +Y+G+ 
Sbjct: 267 KNNPEKVFGVNNAWAEKYPNTHLAVVKALIRAGKWLDENNNANRDEAVKILAKSEYVGAD 326

Query: 533 AGTV---LQRYFDFGLGDEPTQILRFNQFHVDQANYPNPLEGTWLLTQLCRWGLTPLPKN 589
           A  +   +   F++  GD+   +  FN F+   A YP   +  W L+Q+ RWG     K 
Sbjct: 327 AKVIANSMTGTFEYEKGDK-RAVPDFNVFYRYFATYPFYSDAVWYLSQMRRWGQIAEAKP 385

Query: 590 ---RQELLDRVYRRDIY---------EAAIAAVGFPLITPSQRG--FELFDAVPFDPDSP 635
                ++  +VY+ D+Y         E  +A   FP  +   R    E  D + +D   P
Sbjct: 386 DAWYADMAKKVYKPDVYLKAAKLLLDEGKVAKEDFPWDSDGYRAPTAEFIDGISYDGKKP 445

Query: 636 LRYLEQFEI 644
             YL++F I
Sbjct: 446 NDYLKKFTI 454