Pairwise Alignments

Query, 469 a.a., DEAD/DEAH box helicase-like from Synechococcus elongatus PCC 7942

Subject, 542 a.a., ATP-dependent RNA helicase YejH from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  155 bits (393), Expect = 2e-42
 Identities = 123/411 (29%), Positives = 196/411 (47%), Gaps = 41/411 (9%)

Query: 10  QQQVVEELRHSYATGHRSPLVAMPTGAGKTAVFSYISLQSAAKQKRTLILVHRKELLLQA 69
           Q++ +  LR  + + H + +V  PTG+GKT + ++I     ++  R +  V  + L+ Q 
Sbjct: 10  QERALNMLRRDWKS-HNTFMVYAPTGSGKTGLAAFIVDGFVSRGMRVMFCVPYQILITQT 68

Query: 70  SRSLDRLGVRHGLIASGFSWMPYPT-------QVASVQTLVRRL--DRLDWEPELIVVDE 120
           +      G+    I  G+ W  +P        Q+AS  TL+RR   D +D    L+++DE
Sbjct: 69  ASRFIEYGLSGDEI--GYVWASHPNHNPALKIQIASADTLIRREFPDNID----LLIIDE 122

Query: 121 AHHVVPDNTWGKVLSAYPRSR-----VLGVTATPCRTDGRGLGDVFDDLIIGPTIAELTE 175
           AH         ++L    R R     V+G++ TP       LG  +D LI   TI EL +
Sbjct: 123 AHLRKK-----RILQDIERLRASGVKVIGLSGTPFSPF---LGKYYDRLIKPTTIGELIQ 174

Query: 176 RGFLCPTKIYAPPIQADLTGVRMRAG-----DYAKDQLAQAMDKPVIVGDAIDHYRRLCP 230
           RG L   + YAP  + DL GV+ ++      DY + QLA+ M    +VGD + ++     
Sbjct: 175 RGDLSKYEFYAPT-KPDLKGVKTKSSLEYGSDYNEAQLAEIMCGSTLVGDIVQNWLENGR 233

Query: 231 GVPAIGFCASVEIAQKVAVEFSSAGFKAASLDGTLDSATRSHLIDDLGSGRIQVLTSCEI 290
            +P I FC +V  A  + ++F+ AG  A  +        R  +I    +G  +++ S  +
Sbjct: 234 DLPTIAFCVNVAHANYLTIQFNLAGINAEVMTADTPVDERQTIIHRFETGATKIIVSVGV 293

Query: 291 VSEGTDIPVVTAALLLRPTQSLGLYLQQVGRVLRPAPGKSHALILDHVGNVMRHGLPEA- 349
           +  G D  V    +  RPT+S   +LQ +GR LR APGK   LI DH G V R G P++ 
Sbjct: 294 LVAGFDSDV-RCIIYARPTKSEIRWLQAIGRGLRTAPGKESCLIFDHSGTVHRLGYPDSI 352

Query: 350 ---DREWTLEGEKRRSRKGESEEKPETVRQCPKC-FCAHAPQPTCPNCGHR 396
              D     +G +  +R+   E   +  R+C +C +   A    CP CGH+
Sbjct: 353 EYDDLPGKSDGMEESARRSSQERAEKLPRECSQCHYMKPAGVYVCPKCGHK 403