Pairwise Alignments

Query, 469 a.a., DEAD/DEAH box helicase-like from Synechococcus elongatus PCC 7942

Subject, 1169 a.a., Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 59.3 bits (142), Expect = 7e-13
 Identities = 108/414 (26%), Positives = 161/414 (38%), Gaps = 84/414 (20%)

Query: 1   MTPFELRDYQQQVVEELRHSYATGHRSPLVAMPTGAGK--TAVFSYISLQSAAKQKRTLI 58
           M+   LR YQ+  V  +  +   G +  L+AM TG GK  TA+     L  + + KR L 
Sbjct: 439 MSELGLRYYQEDAVRAVEQAIVNGQQHILLAMATGTGKTRTAIALMFRLIQSQRFKRVLF 498

Query: 59  LVHRKELLLQASRSLDRLGVRHGLIASGFSWM----PYP-----TQVASVQTLVRRLDRL 109
           LV R+ L  QA  + +   +      S F        +P       VA+VQ+LV+R  + 
Sbjct: 499 LVDRRSLGEQALGAFEDTRINGDTFNSIFDIKGLTDKFPEDSTKIHVATVQSLVKRTLQS 558

Query: 110 DWEP------ELIVVDEAHH---VVPDNTWGKV--------LSAYPR------SRVLGVT 146
           D EP      + IVVDEAH    +  + T G++        +SAY R      +  + +T
Sbjct: 559 D-EPMPVGRYDCIVVDEAHRGYILDKEQTEGELQFRSQLDYVSAYRRILDHFDAVKIALT 617

Query: 147 ATPCRTDGRGLGDVFDDLIIGPTIAELTERGFLCPTKIYAPPIQA----DLTGVRMRAGD 202
           ATP         D+F + +   T       G+L       PPIQ        GV +  G+
Sbjct: 618 ATP----ALHTVDIFGEPVYRYTYRTAVIDGYLIDQD---PPIQIVTRNAQDGVYLSEGE 670

Query: 203 YAK----------DQLAQAMDKPVI---VGDAIDHYRRLCPG-----------VPAIGFC 238
             +          D LA   D  V     G  I  + R   G              + FC
Sbjct: 671 QVERLNPQGELINDTLADDQDFEVADFNRGLVIPAFNRAVCGELTKYLDPTGQQKTLVFC 730

Query: 239 ASVEIAQKVAVEFSSAGFK-----------AASLDGTLDSATRSHLIDDLGSGRI-QVLT 286
            +   A  V  E  SA  K             + D   D+     +I      R+  ++ 
Sbjct: 731 VTNAHADMVVDELRSAFKKKYPQLEHDAIIKITGDADKDAKKVQSMIVRFNKERLPNIVV 790

Query: 287 SCEIVSEGTDIPVVTAALLLRPTQSLGLYLQQVGRVLR--PAPGKSHALILDHV 338
           + ++++ G DIP +   + LR  +S  LY Q  GR  R  P+ GK+   I D V
Sbjct: 791 TVDLLTTGVDIPSICNIVFLRKVKSRILYEQMKGRATRLCPSVGKTSFKIFDCV 844