Pairwise Alignments

Query, 469 a.a., DEAD/DEAH box helicase-like from Synechococcus elongatus PCC 7942

Subject, 1170 a.a., endonuclease R Type I restriction enzyme from Escherichia coli BL21

 Score = 55.1 bits (131), Expect = 1e-11
 Identities = 100/401 (24%), Positives = 153/401 (38%), Gaps = 82/401 (20%)

Query: 1   MTPFELRDYQQQVVEELRHSYATGHRSPLVAMPTGAGK--TAVFSYISLQSAAKQKRTLI 58
           M+   LR YQ+  V  +  +   G +  L+AM TG GK  TA+     L  + + KR L 
Sbjct: 440 MSELGLRYYQEDAVRAVEKAIVKGQQEILLAMATGTGKTRTAIAMMFRLIQSQRFKRILF 499

Query: 59  LVHRKELLLQASRSLDRLGVRHGLIASGFSWM----PYP-----TQVASVQTLVRRLDRL 109
           LV R+ L  QA  + +   +      S F        +P       VA+VQ+LV+R  + 
Sbjct: 500 LVDRRSLGEQALGAFEDTRINGDTFNSIFDIKGLTDKFPEDSTKIHVATVQSLVKRTLQS 559

Query: 110 DWEP------ELIVVDEAHH---VVPDNTWGKV--------LSAYPR------SRVLGVT 146
           D EP      + IVVDEAH    +  + T G++        +SAY R      +  + +T
Sbjct: 560 D-EPMPVARYDCIVVDEAHRGYILDKEQTEGELQFRSQLDYVSAYRRILDHFDAVKIALT 618

Query: 147 ATPCRTDGRGLGDVFDDLIIGPTIAELTERGFLCPTKIYAPPIQADL----TGVRMRAGD 202
           ATP     +    +F + +   T       GFL       PPIQ        GV +  G+
Sbjct: 619 ATPALHTVQ----IFGEPVYRYTYRTAVIDGFLIDQD---PPIQITTRNAQEGVYLSKGE 671

Query: 203 YAK----------DQLAQAMDKPV--------------IVGDAIDHYRRLCPGVPAIGFC 238
             +          D L    D  V               V + + +Y         + FC
Sbjct: 672 QVERISPQGEVINDTLEDDQDFEVADFNRGLVIPAFNRAVCNELTNYLDPTGSQKTLVFC 731

Query: 239 ASVEIAQKVAVEFSSAGFK---------AASLDGTLDSATR--SHLIDDLGSGRI-QVLT 286
            +   A  V  E  +A  K            + G  D   R    +I      R+  ++ 
Sbjct: 732 VTNAHADMVVEELRTAFKKKYPQLEHDAIIKITGDADKDARKVQTMITRFNKERLPNIVV 791

Query: 287 SCEIVSEGTDIPVVTAALLLRPTQSLGLYLQQVGRVLRPAP 327
           + ++++ G DIP +   + LR  +S  LY Q  GR  R  P
Sbjct: 792 TVDLLTTGVDIPSICNIVFLRKVRSRILYEQMKGRATRLCP 832