Pairwise Alignments

Query, 246 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

Subject, 275 a.a., 3',5'-cyclic-AMP phosphodiesterase from Erwinia tracheiphila SCR3

 Score = 95.1 bits (235), Expect = 1e-24
 Identities = 74/250 (29%), Positives = 110/250 (44%), Gaps = 13/250 (5%)

Query: 3   LSIAQITDLHLLVDPQAALRGCVTTPRAAAVFANLK-QRSP-DLLLLSGDLSEDGSPASY 60
           + I QITD HL       L G  T     AV   +   + P DL++ +GDL++D S  +Y
Sbjct: 15  IRILQITDSHLFAGKHETLLGVNTWASFDAVLQAISASKQPFDLIVATGDLAQDHSVEAY 74

Query: 61  ERLRDWVEELGCPAIAIAGNHD-QPERLTEICGRSPFMGEPVYSIQGWRIIALDSYQPKR 119
           +   + +  L  P + + GNHD QP   + +   +    + V     W+I+ LD+     
Sbjct: 75  QHFAEGIAHLSAPCVWLPGNHDFQPVMFSTLAETNITDAKHVIVGAHWQIVLLDTQVFGV 134

Query: 120 IDGRLRGDQLDWLDQRLGEDSS-PTLLMLHHPPVLIGVTKMDAIGLKDGPEFLEVIAHHQ 178
             G L   QL+WLD  L   S   +L++LHH PV  G   +D   L++      V+  + 
Sbjct: 135 PYGELSEYQLEWLDNTLARQSERHSLVLLHHHPVPSGCNWLDQHSLRNSSMLEAVLQRYP 194

Query: 179 QVRLVLSGHAHQAFIQGRGLTTFLGCPATAMQFD--------QPELPAGWRSLELEPDGS 230
               +L GH HQ           L  P+T +QF           E P GWR LEL  DG 
Sbjct: 195 LASTLLCGHIHQELDLNWNGRRLLATPSTCVQFKPHCTNFTIDSETP-GWRWLELYEDGR 253

Query: 231 WRSQIHWVDT 240
             + +  + T
Sbjct: 254 VETGVERLQT 263