Pairwise Alignments

Query, 292 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

Subject, 294 a.a., 16S rRNA 2'-O-ribose C1402 methyltransferase from Pseudomonas putida KT2440

 Score =  242 bits (617), Expect = 8e-69
 Identities = 139/275 (50%), Positives = 180/275 (65%), Gaps = 6/275 (2%)

Query: 8   TLYLVGTPLGNLEDISYRAVKILRGVDAIAAEDTRRTGRLLQALGIDRPQVSYHEHNRQQ 67
           TLY+V TP+GNL+D+S RA+K+L  V  IAAEDTR + RLLQ  GID P  + HEHN + 
Sbjct: 17  TLYVVATPIGNLDDMSARALKVLADVALIAAEDTRHSIRLLQHFGIDTPLAACHEHNERD 76

Query: 68  RGPELIARLQAGQSIALVSDAGMPAIADPGQELVQAAIAAGLTVVPIAGPSAVIAALCAS 127
            G   +++L AG+++ALVSDAG P I+DPG  LV+ A AAG++VVP+ G  A+IAAL A+
Sbjct: 77  EGGRFLSKLLAGENVALVSDAGTPLISDPGYHLVRQARAAGVSVVPVPGACALIAALSAA 136

Query: 128 GLSSDRFAFEGFLPAKRKARRDVLQSLHQEARTLIFYESPHRLRDTLEDLAAVFGGDRAI 187
           GL SDRF FEGFLPAK+  RR  L+ + +E RTLIFYE+PHR+ + LED+ AVFGGDR  
Sbjct: 137 GLPSDRFIFEGFLPAKQAGRRARLEQVREEPRTLIFYEAPHRILECLEDMEAVFGGDRPA 196

Query: 188 VLARELTKLHEEFWRGSVTE--AIAEFTRREPQGEFTLVVAG--AVVQTQALSEDTLRQE 243
           +LARELTK  E      + E  A       + +GE  ++V G  A    QA+S +   Q 
Sbjct: 197 LLARELTKTFETLKGLPLAELRAFVAGDSNQQRGECVVLVGGWSAPEGEQAISAEA--QR 254

Query: 244 LATLLAAGVSRSEASRTLAAQTGTPKRRLYQLALE 278
           +  LL A +    A+   A  TG  K  LYQLALE
Sbjct: 255 VLDLLLAELPLKRAAALAAEITGVRKNLLYQLALE 289