Pairwise Alignments

Query, 292 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

Subject, 324 a.a., 16S rRNA (cytidine(1402)-2'-O)-methyltransferase from Magnetospirillum magneticum AMB-1

 Score =  230 bits (587), Expect = 3e-65
 Identities = 124/271 (45%), Positives = 173/271 (63%), Gaps = 3/271 (1%)

Query: 9   LYLVGTPLGNLEDISYRAVKILRGVDAIAAEDTRRTGRLLQALGIDRPQVSYHEHNRQQR 68
           LYLV TP+GNL DI+ RA+++L   D +A EDTR TGRL+Q LG+  P   YH+HN  + 
Sbjct: 50  LYLVATPIGNLGDITLRALEVLGHADLVACEDTRVTGRLMQLLGLKAPLAPYHDHNADRA 109

Query: 69  GPELIARLQAGQSIALVSDAGMPAIADPGQELVQAAIAAGLTVVPIAGPSAVIAALCASG 128
            P L+ARL+ G+ +ALVSDAG P ++DPG +LV+  I + + V  + G SAV+ AL  SG
Sbjct: 110 RPGLLARLRQGEVVALVSDAGTPMVSDPGFKLVRDCIESDIAVTALPGASAVLTALQLSG 169

Query: 129 LSSDRFAFEGFLPAKRKARRDVLQSLHQEARTLIFYESPHRLRDTLEDLAAVFGGDRAIV 188
           ++S+RF F GFLP+K  ARR  LQ L     +L+FYESPHR  ++L D+  V  GDR   
Sbjct: 170 IASERFLFAGFLPSKGAARRAALQELALVPASLVFYESPHRTGESLADMVTVL-GDRQGA 228

Query: 189 LARELTKLHEEFWRGSVTEAIAEFTRREPQGEFTLVVAGAVVQTQALSEDTLRQELATLL 248
           + RELTKLHEE  RGS++E    F    P+GE  +VV+G   + +  +   +   L   +
Sbjct: 229 VTRELTKLHEEVVRGSLSELALRFAETPPRGEVAIVVSGP--RAEGGAPQDIEGRLHLEI 286

Query: 249 AAGVSRSEASRTLAAQTGTPKRRLYQLALEV 279
             G+S  +AS  +AA+TG P+R +Y  AL +
Sbjct: 287 EKGLSIKDASALVAAETGHPRRDVYATALRL 317