Pairwise Alignments

Query, 292 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

Subject, 290 a.a., 16S rRNA (cytidine(1402)-2'-O)-methyltransferase from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  194 bits (493), Expect = 2e-54
 Identities = 113/272 (41%), Positives = 161/272 (59%), Gaps = 6/272 (2%)

Query: 9   LYLVGTPLGNLEDISYRAVKILRGVDAIAAEDTRRTGRLLQALGIDRPQVSYHEHNRQQR 68
           LYLV TP+GNL D++ RA+ +L   D + AEDTR T +LL A G+        +H   + 
Sbjct: 21  LYLVATPIGNLRDMTLRALDVLAAADLVLAEDTRVTAKLLSAYGLKARLERCDDHASGRA 80

Query: 69  GPELIARLQAGQSIALVSDAGMPAIADPGQELVQAAIAAGLTVVPIAGPSAVIAALCASG 128
             + I RL+ GQ +ALVSDAG P ++DPG  + +A IA GL V PI G S+++AALC +G
Sbjct: 81  AEQAIERLREGQVVALVSDAGTPLVSDPGFVVARAVIAEGLPVHPIPGASSLLAALCIAG 140

Query: 129 LSSDRFAFEGFLPAKRKARRDVLQSLHQEARTLIFYESPHRLRDTLEDLAAVFGGDRAIV 188
           L +DR  F GFLP K   R   L++L  + +TL+F+ES  RL+D+L D+ AV  G R   
Sbjct: 141 LPADRVLFAGFLPPKTAGRTAALEALKSQRQTLVFFESGPRLKDSLTDMTAVL-GPRPAA 199

Query: 189 LARELTKLHEEFWRGSVTEAIAEFTRREPQGEFTLVVA-GAVVQTQALSEDTLRQELATL 247
           +ARELTKL+EE  RG++ +   +     P+GE  +VV  G  VQ      D    +    
Sbjct: 200 VARELTKLYEECVRGTLDDLAVDPRLDSPKGEIVVVVGPGEEVQATEADADAALIDALQT 259

Query: 248 LAAGVSRSEASRTLAAQTGTPKRRLYQLALEV 279
           L+ G + SE ++ L    G  ++ LY+ ALE+
Sbjct: 260 LSTGDAASEVAKAL----GLNRKTLYRRALEL 287