Pairwise Alignments

Query, 292 a.a., hypothetical protein from Synechococcus elongatus PCC 7942

Subject, 286 a.a., 16S rRNA C1402 2'-O-ribose methyltransferase, SAM-dependent from Escherichia coli BL21

 Score =  245 bits (626), Expect = 7e-70
 Identities = 140/272 (51%), Positives = 173/272 (63%), Gaps = 4/272 (1%)

Query: 9   LYLVGTPLGNLEDISYRAVKILRGVDAIAAEDTRRTGRLLQALGIDRPQVSYHEHNRQQR 68
           LY+V TP+GNL DI+ RA+++L+ VD IAAEDTR TG LLQ  GI+    + H+HN QQ+
Sbjct: 14  LYIVPTPIGNLADITQRALEVLQAVDLIAAEDTRHTGLLLQHFGINARLFALHDHNEQQK 73

Query: 69  GPELIARLQAGQSIALVSDAGMPAIADPGQELVQAAIAAGLTVVPIAGPSAVIAALCASG 128
              L+A+LQ GQ+IALVSDAG P I DPG  LV+    AG+ VVP+ GP A I AL A+G
Sbjct: 74  AETLLAKLQEGQNIALVSDAGTPLINDPGYHLVRTCREAGIRVVPLPGPCAAITALSAAG 133

Query: 129 LSSDRFAFEGFLPAKRKARRDVLQSLHQEARTLIFYESPHRLRDTLEDLAAVFGGDRAIV 188
           L SDRF +EGFLPAK K RRD L+++  E RTLIFYES HRL D+LED+ AV G  R +V
Sbjct: 134 LPSDRFCYEGFLPAKSKGRRDALKAIEAEPRTLIFYESTHRLLDSLEDIVAVLGESRYVV 193

Query: 189 LARELTKLHEEFWRGSVTEAIAEFTRRE--PQGEFTLVVAGAVVQTQALSEDTLRQELAT 246
           LARELTK  E      V E +A     E   +GE  L+V G   Q + L  D LR     
Sbjct: 194 LARELTKTWETIHGAPVGELLAWVKEDENRRKGEMVLIVEGHKAQEEDLPADALR--TLA 251

Query: 247 LLAAGVSRSEASRTLAAQTGTPKRRLYQLALE 278
           LL A +   +A+   A   G  K  LY+ ALE
Sbjct: 252 LLQAELPLKKAAALAAEIHGVKKNALYKYALE 283