Pairwise Alignments

Query, 311 a.a., GTP-binding protein Era from Synechococcus elongatus PCC 7942

Subject, 301 a.a., membrane-associated, 16S rRNA-binding GTPase from Escherichia coli BL21

 Score =  191 bits (485), Expect = 2e-53
 Identities = 112/293 (38%), Positives = 176/293 (60%), Gaps = 8/293 (2%)

Query: 18  GFVALIGRPNVGKSTLMNHLVGQKIAITSPVAQTTRNRLRGVLTTDQVQIVFVDTPGIH- 76
           GF+A++GRPNVGKSTL+N L+GQKI+ITS  AQTTR+R+ G+ T    Q ++VDTPG+H 
Sbjct: 9   GFIAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTEGAYQAIYVDTPGLHM 68

Query: 77  KPQHQLGSVLVQNASSAIRIVDLVLFVVDGS--VPAGRGDAFIADLIQRAGVPTVLGLNK 134
           + +  +  ++ + ASS+I  V+LV+FVV+G+   P    D  + + ++    P +L +NK
Sbjct: 69  EEKRAINRLMNKAASSSIGDVELVIFVVEGTRWTP---DDEMVLNKLREGKAPVILAVNK 125

Query: 135 VDRQLPEDAEAIAASYAQLAGDRDWPLQTFSATTGAGTGALLEQLTHALEPGPYYYPPDL 194
           VD  + E A+ +       +      +   SA TG     +   +   L    +++P D 
Sbjct: 126 VD-NVQEKADLLPHLQFLASQMNFLDIVPISAETGLNVDTIAAIVRKHLPEATHHFPEDY 184

Query: 195 ITDQPERFIMAELIREQILLQTREEVPHSVAVVIERVEEDEK-ITRILAMICVERPSQKA 253
           ITD+ +RF+ +E+IRE+++     E+P+SV V IER   +E+    I  +I VER  QK 
Sbjct: 185 ITDRSQRFMASEIIREKLMRFLGAELPYSVTVEIERFVSNERGGYDINGLILVEREGQKK 244

Query: 254 ILIGKGGSMMKAIGSEARQQMQKLIDGKIYLELFVKVQPKWRQSRSQLEELGY 306
           ++IG  G+ +K IG EAR+ MQ++ +  ++LEL+VKV+  W      L  LGY
Sbjct: 245 MVIGNKGAKIKTIGIEARKDMQEMFEAPVHLELWVKVKSGWADDERALRSLGY 297