Pairwise Alignments

Query, 980 a.a., TonB-dependent receptor from Sphingobium sp. HT1-2

Subject, 887 a.a., TonB-dependent receptor (RefSeq) from Shewanella sp. ANA-3

 Score =  138 bits (348), Expect = 1e-36
 Identities = 172/658 (26%), Positives = 280/658 (42%), Gaps = 95/658 (14%)

Query: 328 QNQERIGGSLTLQFNPDDDTDISLDMLYSRFEVTRRDNYIAAISFARSAANNGQPMTSVR 387
           Q QER     T+QF P D+ +    +L  +       + I A  +  +  N G+  +  +
Sbjct: 258 QEQERTALDATVQFRPTDNLEFGAHVLSLKLGA----DSIGANMYIETDTNWGEGASHCK 313

Query: 388 DIEFDENGSLVQGVFDGVD-----VRSEGLVDHFVSTFKQANLNFRRRLNDSLELSGIVG 442
             +F+  G     V    D      ++        S   + N +++    D   +SG+ G
Sbjct: 314 --QFNAAGVCTLSVTPESDPSNVFFQNWARKGEMTSDTFELNADYK---GDGFAISGVAG 368

Query: 443 FNRSIWDGKKRLQTFMDAIDTDGFSIDYSKGGTTPTLGFGIDVNDPASFNYAPGRADGTV 502
             ++   G +    F      D F       GT    G  ID+N      +   + D TV
Sbjct: 369 KTKAE-GGTQMSANFGYGWWGDKFG-QVKWAGTVDATGKQIDING-RDMGFTQDQLDTTV 425

Query: 503 LGGFSYQGKPSKNTTDN----MTADINLKWTVSDAFSIKGGAEYRRSNFLSTFLRPYNAD 558
            G  ++ G    N+ +     +  D +L + V + F    G  Y +  F  +  R     
Sbjct: 426 -GTSTWTGIKGPNSDEETYLQLDVDFDLDFGVINKFET--GVRYTQHEFEKSEYRAIYD- 481

Query: 559 TVVRALPAGTTLADITTTITGVDKLWGHGAPSSWAAIDP-----EKWADTFGFDDVRYCG 613
                 PA       +   +G  KL   G     A +D      E   D F +    Y  
Sbjct: 482 ------PAKKNEFKTSDLYSGTMKLGYDGWTIPKADLDAMINATESLVDQFAYSRSAYGL 535

Query: 614 VECGGGRSRVREEVMSSYLMANFDLSDAIGFGIRGDVGVRYVKTDMLSSGYIAVAQASSP 673
           +E         E+  S Y M +FD     G G RG+ G+RY++TD+ SSG+I     +SP
Sbjct: 536 IE---------EDNFSMYGMFSFD-----GEGFRGNFGLRYIQTDVTSSGHII---DNSP 578

Query: 674 TGLTG-------QFAAASNSYDDWLPSANIVVEPVENVLVRFSGAKVMARPEL-GLLTPT 725
             + G       +  + S+SY D LPS NI  +   ++++R S  + + RP    L   T
Sbjct: 579 ADILGVNQGWSEEIHSISDSYSDVLPSFNISFDLAPDLILRMSAGQAITRPNYDNLFLST 638

Query: 726 SGVNPVTRVGN----VNNPFLDPIRANTFDVAVEWYFRPGSLLSAAFFYKDIKSFIQNVN 781
           S   P  R GN      NP L P++++  D+++E+Y+  G+L+SA +F KDI +FI  V 
Sbjct: 639 STGYPDDRRGNEEITYGNPGLKPMKSSQADLSLEYYYGDGNLVSATYFIKDISNFI--VA 696

Query: 782 SQIPFNQLGLPNALLENSNTLPDELFTVSQPFNTPGGKLKGIELNAQIPFTFLDGFFSNF 841
           +     Q+G+ N  LE     P + +TV+   N  GG++ GIEL  Q+   F +G    F
Sbjct: 697 TTQYNQQIGVVNNDLET----PADNWTVNNYENAGGGEIDGIEL--QLNHAFENG----F 746

Query: 842 GVLANYTHVTSKIDYILASVNGVPTVTTTADLVGL----SPNTASGTLYYEDDKFSIRTT 897
           GV ANYT+            +G        D +G+    S ++A+   Y+E+D FS R  
Sbjct: 747 GVNANYTY-----------ADGTAPAEVYTDNIGMFTESSKHSANLVGYWENDDFSARAA 795

Query: 898 GNFRDKF-IRGIPASPGSDLQGNAKTFYMDASASYNVTDRLKIIVEAQNLTDEQNRLY 954
            N+R ++ +R      G+ +     T  +D +  +NVT+ + + +E  NLT E +  Y
Sbjct: 796 YNWRSEYMVREYGKYYGNRMHDAFGT--LDVTLGWNVTEAIALRLEIVNLTAEDDVQY 851



 Score =  130 bits (326), Expect = 5e-34
 Identities = 79/232 (34%), Positives = 126/232 (54%), Gaps = 6/232 (2%)

Query: 16  AIALAIAMMAGAPAFAQDQAPQAQPDQENADIVVTGFRASLNSALSMKRQEAAAIDSIVA 75
           AI L  A+  GA A   + A  A   +    I V G RAS  + ++ KR   A +D++ A
Sbjct: 16  AILLGSAVSIGAVAAEAEAAAAATVPENIEKIEVRGIRASNKANINEKRFSNAVVDAVTA 75

Query: 76  EDIGKFPDSNLAESMQRVPGIALQRGDGGEGRNISVRGLGPAFTRTRINGMEGTSQTGSS 135
           EDIGKFPDS++ +++ RVPG+ + R   G+G ++S+RG  P  T T +NG        S+
Sbjct: 76  EDIGKFPDSDVGQALGRVPGVTVGR-TFGQGSSVSIRGTDPLMTLTTLNG----QNVAST 130

Query: 136 DIYGAGNNGRSFDFNVFPTEIFSALSVRKTPSADVEEGSLGATVDLSAPKPMEQKEDFVL 195
             Y   N  RSF++++ P+E+   + V K+  A++ EG +G TV +   KP++   + V 
Sbjct: 131 GWYDQMNVDRSFNYSMLPSELIGGMEVYKSTQANLVEGGIGGTVIVKTRKPLDMDANSVF 190

Query: 196 SMTARGVYNELSKEVDPRASLLVSKKFGDSGFGILGSVAYQKRHIREVGYSA 247
           + + +G Y  ++++V P  S L S K  D  FG+L + +Y  R     G  A
Sbjct: 191 A-SVKGEYGSVNEDVAPELSGLYSWKNDDETFGVLLAGSYIDREYLRTGTEA 241