Pairwise Alignments

Query, 343 a.a., Psp operon transcriptional activator from Sphingobium sp. HT1-2

Subject, 338 a.a., phage shock protein operon transcriptional activator from Vibrio cholerae E7946 ATCC 55056

 Score =  300 bits (769), Expect = 3e-86
 Identities = 159/331 (48%), Positives = 216/331 (65%), Gaps = 11/331 (3%)

Query: 8   VGQSLAFLDAVELAGRAAELNRPVLVIGERGTGKELIAERLHHLSPRWGEPLIVMNCAAL 67
           +G+S AFL  ++   R A ++RPVLVIGERGTGKELIA+RLH+LS RW +PL+ +NC+ L
Sbjct: 6   LGESPAFLAVLDKVSRLAPIDRPVLVIGERGTGKELIAQRLHYLSKRWEQPLVSLNCSTL 65

Query: 68  PETLIEAELFGHEQGAFTGATKARPGRFEEADGGTLFLDELGTLSMAAQERLLRVIEYGE 127
            E LI++ELFGHE G+FTGA     GRFE A+GGTLFLDEL T  ++ QE+LLRVIEYG+
Sbjct: 66  SEGLIDSELFGHESGSFTGAKGRHQGRFERAEGGTLFLDELATAPLSVQEKLLRVIEYGQ 125

Query: 128 VTRIGSSRPVMVDVRIVAATNEDLPAAADAGRFRPDLLDRLSFEVITLPPLRAREGDITV 187
             R+G ++ +  +VR+V ATN +LP  A  G FR DLLDRL+F+VI LP LR R  DI +
Sbjct: 126 YERVGGNQVLNANVRLVCATNANLPQMAQQGTFRADLLDRLAFDVIHLPALRHRPEDIAL 185

Query: 188 LADHFGRRMAAELNWPQWPGFSAACAAELEGYGWPGNVRELRNVVERAVYRWPEPGRPIS 247
           LA+HF  RM  EL  P + GFS     +L+ Y WPGNVREL+NVVERAVY+     +PI 
Sbjct: 186 LAEHFAIRMCRELQLPLFVGFSPNALHQLQAYSWPGNVRELKNVVERAVYQHGLNSQPID 245

Query: 248 AIVFDPFASPWKPRPLMPGTAAVSPESAAPAPVTASVMNGHGDVTDLKSAVDAHEAAIVR 307
            +VF+PF S           + +  + +    V  +         D K+     +  +++
Sbjct: 246 QLVFNPFQS-----------SDIVTDESEQVDVRHTTRTDFHLPLDYKAWQQQCDIELLQ 294

Query: 308 AALERFRYNQRATAKGLGLTYDQLRHCMKKH 338
           AAL + ++NQ+  A+ LGL+Y Q R  M+K+
Sbjct: 295 AALTQAKFNQKHAAQLLGLSYHQFRGMMRKY 325