Pairwise Alignments

Query, 294 a.a., Transcriptional regulator, LysR family from Sphingobium sp. HT1-2

Subject, 314 a.a., DNA-binding transcriptional regulator DsdC from Vibrio cholerae E7946 ATCC 55056

 Score =  102 bits (254), Expect = 1e-26
 Identities = 79/291 (27%), Positives = 135/291 (46%), Gaps = 11/291 (3%)

Query: 7   LTALEAFVQVARLGSVKAAAEELALSTPALSRRVQALERFIGRPLFDRKHQALEINSEGQ 66
           L+ L  F   AR  S   AA+EL+L+  A+S R+  LE  IG  LF+R H+ + +  EGQ
Sbjct: 19  LSKLHTFEVAARHNSFSLAADELSLTPSAISHRINKLEEEIGIKLFERTHRKVVLTEEGQ 78

Query: 67  RLLDDIAPALDSLSQALENIQSGGNQLRLRLAVMPLFATQRLFPHLGRLRQQHPQLHIDI 126
           R+   +   L++L+Q + +I++G     L +   P FA   L P +   ++ +P + + +
Sbjct: 79  RIYHSLQKTLNNLNQEITDIKNGETSGLLTIYSRPSFAQCWLVPRIHAFKELYPSIDLKL 138

Query: 127 ETTPHAVARLGEGLDAAIVLASKDIDPALYAYELDHEQVYLIGRREMVEGPNALASPSEL 186
            T    ++  G G+D AI      +   L   E+  E +  +   E  +   +L S  + 
Sbjct: 139 LTGNENISFQGSGIDVAIYF-DDHMPDKLSCKEIFSETIIPVCTPEYAQ-KYSLTSSMDN 196

Query: 187 AQQTILLHRDMALSF----DAWKDVAG---IPDLQPLAIDNYDSGQLMLEAAAQGLGVAV 239
              T LLH + A ++    D WK  A    + +L+ ++   +D   L + AA    G+A+
Sbjct: 197 LYNTTLLHDNQAWNYNSDADEWKTWANANQLENLENISRIGFDRSDLAVIAAINNAGIAM 256

Query: 240 MHASHFE-QSGDPRLIRLFPNIRCDSPYRYYFVCRPRALQTRSVRIFRDWL 289
              S  + +     L+  +PN       RYY    P     + V++F DWL
Sbjct: 257 GRFSLVKSRLSSGELMTPYPNTEVICKQRYYVATLPNK-HNQKVKLFIDWL 306