Pairwise Alignments

Query, 294 a.a., Transcriptional regulator, LysR family from Sphingobium sp. HT1-2

Subject, 306 a.a., transcriptional regulator GcvA from Vibrio cholerae E7946 ATCC 55056

 Score =  112 bits (279), Expect = 1e-29
 Identities = 89/293 (30%), Positives = 142/293 (48%), Gaps = 10/293 (3%)

Query: 2   RRLPPLTALEAFVQVARLGSVKAAAEELALSTPALSRRVQALERFIGRPLFDRKHQALEI 61
           RRLPPL +L+ F   AR  S   AAEEL ++  A+S +++ALE F+G  LF R++++L +
Sbjct: 3   RRLPPLNSLKVFEAAARHLSFTRAAEELFVTQAAVSHQIKALEEFLGLKLFRRRNRSLLL 62

Query: 62  NSEGQRLLDDIAPALDSLSQALENIQSGGNQLRLRLAVMPLFATQRLFPHLGRLRQQHPQ 121
             EGQ    DI     SL++A + +     +  L +++ P FA Q L P L    QQ P 
Sbjct: 63  TEEGQSYFLDIKDIFSSLAEATDKLLERSEKGALTISLPPSFAIQWLVPRLADFNQQEPD 122

Query: 122 LHIDIETTPHAVARLGEGLDAAIVLASKDIDPALYAYELDHEQVYLIGRREMVEGPNALA 181
           + + I+        L + +D AI    +   P L A +L  E +  +    ++ G   + 
Sbjct: 123 IDVRIKAVDMDEGSLTDDVDVAIYY-GRGSWPGLRADKLYQEFLIPLCSPALLLGNKPME 181

Query: 182 SPSELAQQTILLHRDMALSFDAWKDVAGIPDLQPLAIDN---YDSGQLMLEAAAQGLGVA 238
             S+LA  T LLH     S   WK  A    L  + +++   +    ++L+AAA G GVA
Sbjct: 182 KLSDLAYHT-LLH---DTSRKDWKQFAKENGLDNVNVNHGPIFSHSTMVLQAAAHGQGVA 237

Query: 239 VMHASHFEQSGDP-RLIRLFPNIRCDSPYRYYFVCRPRALQTRSVRIFRDWLV 290
           + +    +   D  RLI  F  +   +   +Y VC  +      +  FRDW++
Sbjct: 238 LGNNVLAQPEIDAGRLIAPFDEVLMTN-NAFYVVCHEKQADMGRIATFRDWML 289