Pairwise Alignments

Query, 595 a.a., Lytic murein transglycosylase from Sphingobium sp. HT1-2

Subject, 664 a.a., Lytic transglycosylase, catalytic (NCBI) from Rhodospirillum rubrum S1H

 Score =  100 bits (250), Expect = 1e-25
 Identities = 102/356 (28%), Positives = 144/356 (40%), Gaps = 27/356 (7%)

Query: 218 ARRLAARALETRTGGDWTVQAHWTTGLAAWR-QNDCRAAAPAFANVAALAGDADMRAAGA 276
           A RLAA     R  G    +  W  G  A R  +D   A   F  +          + GA
Sbjct: 294 AYRLAATHENDR--GAAFAEGEWLAGWIALRFLHDAPQAFKHFKTLYEGVSTPISLSRGA 351

Query: 277 YWASRAYMVCGEAEKVENMLKLAARSDETFYGLLARESLGMPLGGATMNARFSDNDWRQL 336
           YWA RA       ++     + A+    TFYG LA E  G PL      A  + +D  + 
Sbjct: 352 YWAGRAAEAMKRPDEARQWYQKASAFPATFYGQLAAERTGAPLSKLLPKADAAASD-AER 410

Query: 337 KDSPNVRSAIALADIGENGRADEILRYQAKLGGTAQYDALLRLASALNL----PATQLWL 392
           K   N R  +  + + + GR DE+L +   L    + D    + + + L    P   +++
Sbjct: 411 KALANDRLVVIASQLAQIGRIDELLSFTLALNTKHKGDGARAMIAGIALKAGYPGVGVFV 470

Query: 393 AHNGPAGKQPDSFARFPAP-AWRPDGGWR-----VDPSLIYAHTLQESGFRSDVVSSAGA 446
           +            A +P P A  P          VDP+ +     QES F     S+ GA
Sbjct: 471 SRRAAQDGTYLVEAGYPLPKALAPSISEHARRQGVDPAALLGLIRQESNFDRAARSAVGA 530

Query: 447 RGLMQVRPGTA----GDVGLSNASQLFV--PSTNMEYGQRYLESLRDMSATGGLLPKVMA 500
            GLMQ+ PGTA    G  GL+    L    P  N+  G RY   L  +    G +    A
Sbjct: 531 LGLMQLMPGTARTVSGQEGLAFDQALLTRDPLYNVRLGARYFGDL--LKRFDGSVVLAAA 588

Query: 501 AYNAGPLPVERW-----NSEVKDKGDPLLFIESLPYYETRAYVNIVMRNYWMYQIQ 551
           AYNAGP     W     +    D  D + +IE +PY ETR YV  V+    +YQ++
Sbjct: 589 AYNAGPGRPTEWIARNGDPRAMDLADAIDWIEMIPYRETRNYVQRVIEGMLVYQVR 644