Pairwise Alignments

Query, 344 a.a., Transcriptional regulator, LacI family from Sphingobium sp. HT1-2

Subject, 335 a.a., LacI family transcription regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  148 bits (373), Expect = 2e-40
 Identities = 100/334 (29%), Positives = 163/334 (48%), Gaps = 8/334 (2%)

Query: 11  IRAVAERAGVSAMTVSNVINGAGRASATTVATVQAAIAELGYVPNLAARRLAKARATTVG 70
           I+ V+E AGVS  TVS  +    R S  T A V  A+ + GY PN  A  +   ++  + 
Sbjct: 4   IKKVSELAGVSTATVSRTLKSPERVSEQTRAKVMQAVKQAGYRPNWMATSVKTGKSNAIV 63

Query: 71  LIYSNRRTPFLDAVLVGSLRATNANGLQLILRDGDGVTLDEAERIAQELVRSGADALLLI 130
           ++  N   PF   ++ G  +A    G  ++L D  G+   E E  A  ++ + AD L+ +
Sbjct: 64  VLVPNLVNPFFMRIIEGIEQAAQEKGYCVLLGDTQGLQAREHE-YASMVLTNRADGLIQL 122

Query: 131 PPFAEQLSGSAILPALGVPFAAIATGTPLSG---ISTVRIDNQAAMEALTRRVIADGHRR 187
                     A L A  +P  ++     + G      + +DN AA  AL   +I  GH+ 
Sbjct: 123 DHSFPFSDNDADLAAT-IPMVSVCER--IEGDRKYPFIELDNHAAGRALAHHLIGFGHKH 179

Query: 188 IAYVAGPDHYSVVAARLDGFYAALQDAGLRVDDSLIVEHSAFDHASGMAAAQALLARPDR 247
              +AG     +   RL G  + LQ  G+   + ++V  S++   +G+  A+ LL+R  R
Sbjct: 180 FGIIAGQRRSQIHHDRLTGIMSVLQGEGIDFKEDMLVG-SSYSIETGIEGARELLSRNPR 238

Query: 248 PTAILCSSDDLAAGVIAQAGQMGLNLPHDLSVTGFDDTILASRVWPPLTVIRQPVEDMAF 307
           P+AI C +DD+A G + +    GL +P D+SVTGFD+  +++ + PPLT I QP  +M  
Sbjct: 239 PSAIFCFNDDIAIGAMFEIKSQGLKIPDDISVTGFDNVKVSAYMDPPLTTIDQPAYEMGR 298

Query: 308 RATQCLIGALGKGGMRVSDEIFDHQLVQRASIAP 341
            A + L+  + +  +  S  I    L++R S  P
Sbjct: 299 NAVEVLVQQINRLPLARSRVIMPFHLLERGSTGP 332