Pairwise Alignments

Query, 590 a.a., ATP-dependent DNA helicase RecQ from Sphingobium sp. HT1-2

Subject, 451 a.a., ATP-dependent RNA helicase RhlE from Vibrio cholerae E7946 ATCC 55056

 Score = 64.3 bits (155), Expect = 1e-14
 Identities = 79/328 (24%), Positives = 133/328 (40%), Gaps = 28/328 (8%)

Query: 14  GFTTFRGVQEQVVGRVMAGQPTLAIMPTGAGKSLCYQLPAVAL--DGCCVVVSPLIALMH 71
           G+ T   +Q Q +  V+AG+  +A   TG GK+  + LP + L   G  V  + + AL+ 
Sbjct: 20  GYNTPSPIQLQAIPAVLAGKDVMAAAQTGTGKTAGFTLPILELLAKGPKVRANQVRALIL 79

Query: 72  DQLRAATA------------VGIRAASLTSVDADWRETQDRLRNGELDLLYVAPERASGE 119
              R   A            + +++A +            R+  G  D+L   P R    
Sbjct: 80  TPTRELAAQIQDNVMLYGRHLPLKSAVVFG-GVKINPQMQRMCKGA-DILVATPGRLMDL 137

Query: 120 GFRNLLRSAKVALFAIDEAHCVSEWGHDFRPDYRLLRPLLDEFPDVPRLALTATADAHTR 179
             +N ++  ++ +  +DEA  + + G   R  +++L+ L ++  +   L  +AT     R
Sbjct: 138 YNQNAVKFDQLEILVLDEADRMLDMGF-IRDIHKILKLLPEKRQN---LLFSATFSTEIR 193

Query: 180 KDILVQLGIP-EDGLIISGFDRPNIRYAVHPRDGLTRQLADLLAANPGPG-----VVYAP 233
           +     +  P E  +  +      +   ++P D   ++  D+L      G     +V+  
Sbjct: 194 ELAKGLVNNPVEISVSPANSTARTVEQCIYPAD--VKKKPDMLVKLVKEGNWQQVLVFMR 251

Query: 234 TRAATEKLAETLGRGGRAVRAYHAGMDPAQRAANQAAFIASEDMVMVATVAFGMGIDKPD 293
           T+    +LA  L   G    A H       R    A F A E  ++VAT     GID P 
Sbjct: 252 TKHGANRLATYLNEQGLTAAAIHGNKSQGARTRALADFKAGEVRILVATDIAARGIDIPQ 311

Query: 294 VRFVAHAGLPKSIEGYYQESGRAGRDGE 321
           +  V +  LPK  E Y    GR GR GE
Sbjct: 312 LPQVVNFELPKIAEDYVHRIGRTGRAGE 339