Pairwise Alignments

Query, 590 a.a., ATP-dependent DNA helicase RecQ from Sphingobium sp. HT1-2

Subject, 503 a.a., ATP-dependent RNA helicase from Sinorhizobium meliloti 1021

 Score = 71.2 bits (173), Expect = 9e-17
 Identities = 88/365 (24%), Positives = 147/365 (40%), Gaps = 36/365 (9%)

Query: 14  GFTTFRGVQEQVVGRVMAGQPTLAIMPTGAGKSLCYQLPAV---ALDGC--------CVV 62
           GF     +Q Q +  V+     + +  TG GK+  + LP +     DG          +V
Sbjct: 21  GFEKPTPIQAQAIPLVLKDHDLIGLAQTGTGKTAAFGLPMIEKLVADGRRPDPRNIRALV 80

Query: 63  VSPLIALMHDQLRAATAVGIRAA----SLTSVDADWRETQDRLRNGELDLLYVAPERASG 118
           ++P   L++ Q+ A   + ++ +     L        +  ++L  G +D+L   P R   
Sbjct: 81  LAPTRELVN-QIAANLKLFVKKSPLKIGLVVGGVSINKQTEQLARG-VDILVATPGRLLD 138

Query: 119 EGFRNLLRSAKVALFAIDEAHCVSEWG--HDFRPDYRLL---RPLLDEFPDVPRLALTAT 173
              R  +   +     +DEA  + + G  HD R   +L+   R  L     +P+L +   
Sbjct: 139 LVSRKAVTLTQARYLVLDEADQMLDLGFIHDLRKISKLVPKNRQTLLFSATMPKL-IAEL 197

Query: 174 ADAHTRKDILVQLGIPEDGLIISGFDRPNIRYAVH---PRDGLTRQLADLLAANP-GPGV 229
           A  +    + V++  P       G     +   VH    +D  T  L   L ANP G  +
Sbjct: 198 AGEYLTDPVKVEVSPP-------GKAADKVEQYVHFVPGKDLKTTILKQTLTANPDGLSL 250

Query: 230 VYAPTRAATEKLAETLGRGGRAVRAYHAGMDPAQRAANQAAFIASEDMVMVATVAFGMGI 289
           +++ T+   EKL + L   G    + H      QR     AF   E  V+VAT     GI
Sbjct: 251 IFSRTKHGAEKLMKHLDHVGFKAASIHGNKSQGQRERALKAFRDGEIRVLVATDVAARGI 310

Query: 290 DKPDVRFVAHAGLPKSIEGYYQESGRAGRDGEPAVAHLFWGAEDFARAR--QRIMELEPA 347
           D P V  V +  LP+  + Y    GR  R+G   +A  F   ++    R  +++M ++ A
Sbjct: 311 DIPGVTHVYNYDLPEVPDAYVHRIGRTARNGRDGIAIAFCAPDEIRLLRDIEKLMGIQIA 370

Query: 348 RQQGE 352
              GE
Sbjct: 371 VASGE 375