Pairwise Alignments

Query, 275 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Sphingobium sp. HT1-2

Subject, 239 a.a., Lipopolysaccharide ABC transporter, ATP-binding protein LptB from Xanthomonas campestris pv. campestris strain 8004

 Score =  267 bits (682), Expect = 2e-76
 Identities = 139/238 (58%), Positives = 172/238 (72%), Gaps = 1/238 (0%)

Query: 39  LSVISIAKSYDKRVVLSDVSLTVGKGEVVGLLGPNGAGKTTCFYSVMGLVRPDQGRIILD 98
           L    + K Y +R V+ +  LT+  GEVVGLLGPNGAGKTTCFY ++GLV  D GRI LD
Sbjct: 2   LVATGLRKKYKQREVVKEFGLTLEAGEVVGLLGPNGAGKTTCFYMIVGLVEADAGRIELD 61

Query: 99  GQDITGLPMYRRAILGLGYLPQETSIFRGLTVEQNIGAVLEMAEPNKAARAEK-LEQLLD 157
           G+D+T  PMY RA LG+GYLPQE S+FR L+V  NI  VLE+ +       EK L  LL+
Sbjct: 62  GRDLTAEPMYARAKLGVGYLPQEPSVFRKLSVADNIRLVLELRDDLDGPGQEKELASLLE 121

Query: 158 EFGLTRLRDSAAMALSGGERRRCEIARALAADPSIVLLDEPFAGIDPLSIADIRDLVKQL 217
           E  +T + D    +LSGGERRRCEIARALAA P ++LLDEPFAG+DP+S+ +I+ +V  L
Sbjct: 122 ELQITHVADQLGASLSGGERRRCEIARALAAKPRMMLLDEPFAGVDPISVGEIQRIVIHL 181

Query: 218 KTRGIGVLITDHNVRETLEIVDRACIIYSGQVLFAGSPTELVAHPDVRRLYLGENFQL 275
           K RGIGVLITDHNVRETL I DRA I+  G VL  G+P  L+ +PDVRR+YLG+ F+L
Sbjct: 182 KERGIGVLITDHNVRETLGICDRAYILAEGGVLAQGAPDALLNNPDVRRVYLGDTFRL 239