Pairwise Alignments

Query, 357 a.a., DNA recombination and repair protein RecF from Sphingobium sp. HT1-2

Subject, 363 a.a., DNA replication and repair protein RecF from Vibrio cholerae E7946 ATCC 55056

 Score = 95.1 bits (235), Expect = 3e-24
 Identities = 96/364 (26%), Positives = 158/364 (43%), Gaps = 23/364 (6%)

Query: 2   IGRLTLSDFRNHADALIVPDQPFVLLTGDNGAGKTNILEAVSMLAPGRGLRGAALRAMAR 61
           + RL +  FRN     I     F  L G NG+GKT++LEA+ +L  GR  + +    + +
Sbjct: 3   LSRLMIQQFRNIKACDIRLSAGFNFLIGPNGSGKTSVLEAIYLLGHGRSFKSSLTGRIIQ 62

Query: 62  QDGGGSF--GIAAE----VDGVVLGTGVSVDAPDRRQVRIGGVASSANA-LADHLSIVWL 114
            +    F  G   E     D   L  G++       +V+IGG      A LA  L +  +
Sbjct: 63  NECSELFVHGRICEHSLSSDQFELPVGINKQRDGSTEVKIGGQTGQKLAQLAQILPLQLI 122

Query: 115 TPAMDRLFLDSPGGRRRFLDRLTLALHPGHAAHSARYEAAMRARNRLLTDLR--RADPAW 172
            P    L  D P  RR F+D       P       R++   + RN LL   +  R    W
Sbjct: 123 HPEGFELLTDGPKQRRAFIDWGVFHTEPAFFDAWGRFKRLSKQRNALLKSAQSYRELSYW 182

Query: 173 ---IGALEAQMDEHGTALAAARADLVARLNRQLVDQPDEPFARPLIRIAREDG-ASDEPL 228
              +  L  Q+D+   +      ++  +L R  + + D       I +    G   D+P 
Sbjct: 183 DQELARLAEQIDQWRESYVNQLKNVAEQLCRTFLPEFD-------IDLKYYRGWEKDQPY 235

Query: 229 GQRLARERRRDAAAGRTLSGPHRHDLDVIHIAKNQAAALCSTGEQKALLLSILLAHAALV 288
              L +   RD   G T SGP++ DL  I +       + S G+ K ++ ++ +A    +
Sbjct: 236 QSILEKNFERDQQLGYTFSGPNKADLR-IKVNATPVEDVLSRGQLKLMVCALRVAQGQHL 294

Query: 289 SADRGQPPVLLLDEVAAHLDPSRRAALFDRLRETGGQVWMTG-TEDSLFNELNGATR-LH 346
           +   G+  + L+D+ A+ LD  RR  L D L+ TG QV+++  TE  + + L+ +++  H
Sbjct: 295 TELTGKQCIYLIDDFASELDSLRRQRLADSLKGTGAQVFVSSITESQVADMLDESSKTFH 354

Query: 347 VTAG 350
           V  G
Sbjct: 355 VAHG 358