Pairwise Alignments

Query, 186 a.a., outer membrane protein-like from Sphingobium sp. HT1-2

Subject, 237 a.a., porin family protein from Rhodopseudomonas palustris CGA009

 Score = 51.2 bits (121), Expect = 1e-11
 Identities = 56/189 (29%), Positives = 80/189 (42%), Gaps = 32/189 (16%)

Query: 8   IASAVLCFVSAPAFAQDYAPFTGAHA-------EII---TGYDVVDAKG--------VKS 49
           + +A +  +SAPAFA D  P     A       E++   TG+ V    G        +  
Sbjct: 6   LGAAAVIALSAPAFAADLPPRPYTKAAPAYTAPEVVYNWTGFYVGGHVGGAWAGDNNITG 65

Query: 50  ADGLLYGL---NAGYDFALGGLILGIEGE---ISDSTTRLHVAGGKSETDRDLYVG---G 100
             G  +G     A Y FA   +I GIE +   +S + T +   GG + T+    +G   G
Sbjct: 66  NSGRFFGGVQGGADYQFATNWVI-GIEAQYSWMSSNNTGVIFPGGSTATEDTRGLGSVTG 124

Query: 101 RIGVPLGSKALAYVKAGYSNARMEYEASDGEG---GLIRGGANGDGLRLGAGLEYRIAEK 157
           R+G   G   L Y K GY+    +   +   G   G    G+  DG  +GAGLEY  A  
Sbjct: 125 RLGYAWGP-TLVYAKGGYAWRDSDLSVASLGGVPSGYTTSGSRNDGYTVGAGLEYMFAPS 183

Query: 158 LFLKGEYRY 166
              K EY+Y
Sbjct: 184 WSAKVEYQY 192