Pairwise Alignments

Query, 370 a.a., DNA polymerase III beta subunit (EC 2.7.7.7) from Sphingobium sp. HT1-2

Subject, 384 a.a., DNA polymerase III, beta subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  112 bits (280), Expect = 2e-29
 Identities = 84/376 (22%), Positives = 169/376 (44%), Gaps = 9/376 (2%)

Query: 1   MKATIERATLLKSLSHVQSVVERRNTIPILSNVLIEASADGAIKLMATDLDLQVVESVSA 60
           M   + +  +++ L    +++  +     L ++ + A ADG + +MATD +++   + +A
Sbjct: 1   MYLKVYKEDVIEGLQKAANIIPAKTGAAYLRSIWLNA-ADGTLSVMATDSNIEFRGTYTA 59

Query: 61  QVEQAGATTISAHTLFDIARKLPEGSQVSLQAADGKML-IQAGRARFNLSTLPRDDFPVI 119
           +V + G   +      D+ RKLP G  V    A+  +L I+ GR ++ L       F   
Sbjct: 60  EVTEPGLAGVQGRAFVDLLRKLPAGEIVLQLDAEANVLRIEQGRRKYKLPVNDPVWFQNF 119

Query: 120 AEGDLPTSFELPAETLKQIIDKTRFAISTEETRYYLNGIYFHVSDEGSPVLKAAATDGHR 179
           ++     +     + L+++ID+  F IS E+    +  ++     EG   ++A   +GH+
Sbjct: 120 SDFPADGAVVWSGDFLQELIDRIAFCISDEDAVEAIACLFMKPVAEGR--IEACGLNGHQ 177

Query: 180 LARVTVPRPDGADGMP--GIIIPRKCIAELRKLLDEVEGSVQVSLSASKIRFGLGSAILT 237
            A +     D    +P  G+++ +K + EL+K L   E  + +S     +R G G    +
Sbjct: 178 FAMLRFLHDDLHAKLPAEGVLVQKKYLGELKKWLGADEIELNISEKRMHLRTGDGRETFS 237

Query: 238 SKLIDGTFPDYSRVIPTANDK---LLKIDPRSFEEGVDRVATIATEKTRAVKMSLDKDKI 294
             L    +PDY   I     +    L++D +   + +DR+    ++  R     L   ++
Sbjct: 238 LPLSSYQYPDYMNFIAKLQGEGVSNLEVDRKEGMDALDRLQIFNSDNNRCTYFDLSGGEV 297

Query: 295 TLSVTSPENGTAAEEVPGAFQGEGFDIGFNARYLLDILGQIDTDIVELHLADAAAPTLIR 354
            L+    + G+A+E +  ++ G+   I F  R L+DI+    +  + L L  A  P  I 
Sbjct: 298 VLTAQGQDVGSASESLEASYDGDIRRIAFPTRNLIDIMNHYQSGRLRLTLTGAEGPCGIS 357

Query: 355 ENDRSPALYVLMPMRV 370
             +      ++MPM++
Sbjct: 358 GEEDPEYQVIVMPMKI 373