Pairwise Alignments

Query, 865 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 886 a.a., Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) from Rhodospirillum rubrum S1H

 Score =  338 bits (868), Expect = 6e-97
 Identities = 188/453 (41%), Positives = 265/453 (58%), Gaps = 6/453 (1%)

Query: 309 PVFNEYGQFHGFRGSGTDLTEMRRSQAEVTRLAQYDSLTGLANRVQMLQALEQAVLGSRG 368
           P+ +  G+         D+T  ++++  +  L+ YD+LT L NRV     L QAV+ +R 
Sbjct: 412 PIVDASGRLSHLVAVDEDVTARKKAEERIRYLSNYDTLTRLPNRVLFRDRLYQAVVQARR 471

Query: 369 KQGECALMMLDLDRFKSVNDTLGHPAGDALLRQVSQRLQRVVGNQGLVGRQGGDEFKVLV 428
             G  A+M +DLD+F  VNDTLGH AGD LL  ++ R+         V R GGDEF ++ 
Sbjct: 472 GHGGLAVMFIDLDQFSLVNDTLGHAAGDHLLMTIASRINAAAEEADTVARVGGDEFALIQ 531

Query: 429 HGRHDRNRLGLLAQAIISALSQPYSIEGTGVVIGVSIGISFCPEDGVTADALIRNADLAL 488
                 +    LA+ +I  +  P  + G  VVIG ++GI+  P+DG   D L++NAD+A+
Sbjct: 532 TALTSADSAASLARRLIDVIRTPVDLGGREVVIGANVGIAIYPQDGTDPDNLMKNADMAM 591

Query: 489 YKAKGDGRGVYRFYSADMHADAEDRRQLEQDLRHAL-TADGLHLVYQPIVSSTTERITGY 547
           Y+A   G     F+S +M+A+A  R  LE+DLR AL + D L L YQ      + R  G 
Sbjct: 592 YRAVKSGDDSCCFFSNEMNAEAAVRLSLEEDLRRALDSGDQLFLHYQLQFCIESGRPVGA 651

Query: 548 EALLRWDHPVRGAISPALFVPIAEDSGLIAPIGEWVMRTACRDAAQWDAG----IRVAVN 603
           EAL RW HP  GAI P  F+P+AEDSGLI  +G+WV+ TA  + A+W A     + +AVN
Sbjct: 652 EALARWTHPTLGAIPPTRFIPVAEDSGLILALGDWVLGTALAEYARWRAAGCGRLTIAVN 711

Query: 604 VSAMQFANPGFPTTVMQALASAQLAPERLELEITESVFLNDNDGTDAMFTRLKGLGVRLV 663
           +SA+QF   G    V   LA   + PE LELE+TES+ + D D   A  T L   G+RL 
Sbjct: 712 MSAVQFRQKGLVERVTDLLAQHGVPPEDLELELTESMLMQDADQAVAQLTALSQAGIRLS 771

Query: 664 LDDFGTGYSSLGYLKKAPFDKIKIDQSFVRGAAIRGSRNSAIIKAIVSLAEALGMDTTAE 723
           +DDFGTGYSSLGYLK    DK+K+DQSFVR     G+ ++ I +AI++L  +LG++  AE
Sbjct: 772 IDDFGTGYSSLGYLKLFRVDKLKVDQSFVRDVTEDGN-DAVIARAIINLGHSLGLEVIAE 830

Query: 724 GAETRDELDLIRQLGCSHIQGYIYGRPMPAAQV 756
           G ET +++  +R+ GC  +QGY+   P P   V
Sbjct: 831 GVETPEQMAYLRREGCDVVQGYLMAYPEPGETV 863