Pairwise Alignments

Query, 534 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 522 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 49.7 bits (117), Expect = 3e-10
 Identities = 60/226 (26%), Positives = 95/226 (42%), Gaps = 37/226 (16%)

Query: 255 LAKTGPAPV---LEINSDVRFDDSD--VNAYNILADIPGSDPKAGYVMAGAHLDSWVAGD 309
           +A+   +P+   LE  +++ F +     N+YN++A + GS     +++   H D     D
Sbjct: 234 MARAADSPINLPLEQTANIAFKNKAEYANSYNVVATLAGSQQADEHILFTGHWDHIGKDD 293

Query: 310 ---------GAADNGAGSAMIMEAARILK---SLGIKPKRTIRFALWSGEEQGLFGSMAY 357
                    GA DN +G A I+E AR L    + G    R++ F   +GEEQGL GS  Y
Sbjct: 294 SKEGDKIYNGAMDNASGIAGILEIARQLADNATQGHGLARSVTFIATTGEEQGLLGSRYY 353

Query: 358 -------VDEYLATRAPGPKEEQGREEMYFRYKTRFPITPKPGYADLKAYFNIDNGSGKL 410
                  +D+ +A          G+ +        F I  K G ++L+ Y  ID    + 
Sbjct: 354 AANPIYPIDKTVAVLNLDSTNIYGKTK-------DFTIVGK-GKSELENYL-IDAAKQQN 404

Query: 411 RGLYAERNVAAVSLLREWLSPFASMGAGNVV----SQPTGGTDHEY 452
           R    E+N A+    R     FA +G   V     S+P      +Y
Sbjct: 405 RIALGEKNPASGGFFRSDHFSFAKLGVPAVFAGGGSEPIDAATADY 450