Pairwise Alignments

Query, 727 a.a., Excinuclease ABC subunit B from Sphingobium sp. HT1-2

Subject, 669 a.a., excinuclease ABC subunit UvrB from Synechocystis sp000284455 PCC 6803

 Score =  663 bits (1710), Expect = 0.0
 Identities = 345/662 (52%), Positives = 448/662 (67%), Gaps = 5/662 (0%)

Query: 35  FTLVSDYEPSGDQPTAIAELVAAAKQGEKDQVLLGVTGSGKTFTMAKTIEALQRPALILA 94
           F+L + + P+GDQPTAIA L+ + +   K Q LLG TG+GKTFTMA  I  L RP L+LA
Sbjct: 6   FSLHAPFRPTGDQPTAIASLIESLQGEHKFQTLLGATGTGKTFTMASVIAELGRPTLVLA 65

Query: 95  PNKILAAQLYGEFKSFFPDNAVEYFVSYYDYYQPEAYVARSDTYIEKESSVNESIDRMRH 154
            NK LAAQL  E + FFP+NAVEYF+SYYDYYQPEAY+  +DTYIEK +S+N+ ID +RH
Sbjct: 66  HNKTLAAQLCNELRQFFPENAVEYFISYYDYYQPEAYIPVTDTYIEKTASINDEIDMLRH 125

Query: 155 SATRALLERDDVIIVASVSCLYGIGSVETYSAMTFSMKKGGIEDQREIIRKLVALQYKRN 214
           SATR+L ER DVI+VAS+SC+YG+G    Y      ++ G   D R +IR LV +QY RN
Sbjct: 126 SATRSLFERRDVIVVASISCIYGLGIPSQYLKAAVPLQVGAEYDPRLVIRDLVNVQYSRN 185

Query: 215 DAGFARGNFRVKGDNLEIFPSHYEDTAWRISFFGDEIEEIVEFDPLSGRKVASLDYVKVF 274
           D    RG FR+KGD LEI P+ YED   RI FFGDE+E +   DP+SG  + SLD + ++
Sbjct: 186 DVELQRGRFRLKGDVLEIVPA-YEDRVIRIEFFGDEVEALRLIDPVSGEILQSLDRISIY 244

Query: 275 PNSHHVTPGPTLKQAMEAIRFELTERLKELEAEGKLLEAQRLEQRTNFDLEMIAATGSCA 334
           P  H VTP  TL++A + I+ E+ +++  LE    L+EAQRL QRT +DLEM+   G C 
Sbjct: 245 PARHFVTPEETLEKACQQIQTEMEQQVAFLEKNNLLVEAQRLSQRTRYDLEMLREVGYCN 304

Query: 335 GIENYSRFLTGRLPGEPPPTLFEYLPENAVLFVDESHQTVPQIGAMARGDHRRKITLAEY 394
           G+ENYSR+L  R  GEPP  L +Y PE+ +L +DESH T+PQ+  M  GD  RK  L ++
Sbjct: 305 GVENYSRYLADRQAGEPPECLVDYFPEDWLLVIDESHVTIPQLRGMYNGDQARKKVLIDH 364

Query: 395 GFRLPSCIDNRPLRFNEWDAMRPQTVSVSATPGPWEMEQTGGVFSEQVIRPTGLIDPPVE 454
           GFRLPS  DNRPL+  E+     Q V VSATPG WE+EQ+     EQVIRPTG++DP + 
Sbjct: 365 GFRLPSAADNRPLKAEEFWQKVKQCVFVSATPGVWEIEQSEARVIEQVIRPTGVLDPEIF 424

Query: 455 IKPVEDQVDDLINECRKVAAQGYRTLVTTLTKRMAEDLTEFMHEAGIKVRYMHSDVETLE 514
           ++P   QVDDL  E +       R L+TTLTKRMAEDLT++  E GIKV+Y+HS++++++
Sbjct: 425 VRPTTGQVDDLYGEIQTRVKLKERVLITTLTKRMAEDLTDYFSERGIKVQYLHSEIQSIQ 484

Query: 515 RIELIRDLRLGVYDVLIGINLLREGLDIPECGLVAILDADKEGFLRSETSLIQTIGRAAR 574
           RIE+++ LR G +DVLIG+NLLREGLD+PE  LVAI+DADKEGFLR+E SLIQTIGRAAR
Sbjct: 485 RIEILQALRDGEFDVLIGVNLLREGLDLPEVSLVAIMDADKEGFLRAERSLIQTIGRAAR 544

Query: 575 NVDGRVILYADRVTGSMERALNETSRRREKQQAYNDAHGITPFTVKKNIGDIIAHVAS-- 632
           ++ G+ ILYAD  T SM++A+ ET RRR+ QQ YN+ HGITP  + K   + I       
Sbjct: 545 HIRGQAILYADNFTDSMQKAIAETERRRKIQQEYNEKHGITPQPINKRANNAILQFLDIS 604

Query: 633 --KDQVTVETGLEDRPHLVGHNLRAYIEDLEKKMRAAAADLEFEEAGRIRDEIRKLEAEE 690
              +   +E   E    L    +   I+ LE+KM+ AA   EFE A   RD I+ L    
Sbjct: 605 RRLNSQQLEEVYEQAQDLPLEKIPDLIQQLEEKMQEAAKKQEFEVAAIYRDRIQHLRDRL 664

Query: 691 LG 692
           LG
Sbjct: 665 LG 666