Pairwise Alignments

Query, 405 a.a., Outer membrane protein romA from Sphingobium sp. HT1-2

Subject, 392 a.a., MBL fold metallo-hydrolase from Vibrio cholerae E7946 ATCC 55056

 Score =  112 bits (281), Expect = 1e-29
 Identities = 78/260 (30%), Positives = 132/260 (50%), Gaps = 33/260 (12%)

Query: 103 RGMVATWVGHATVLVQAAGINILTDPIWSDHASPFPPLG--PKRVAEPGIRMKDLPRIDL 160
           + +  TW+GH+++ ++  G+ +LTDP++ D+ASP+       + +   G+R + LP  D+
Sbjct: 93  KALRVTWLGHSSLFIEVDGLRVLTDPVF-DYASPWIAKAWFARNLPNSGVR-EQLPLPDV 150

Query: 161 IVISHNHYDHLDIPTLKALWQRDRPRIVTALGNDTILKANGIPSVALDWGQSVTGAQLNG 220
           IVISH+HYDHL+  ++          +  A  + T     G+    + WG S        
Sbjct: 151 IVISHDHYDHLEQASV----------VYYAAHSVTFYVPLGVGQHLIRWGVS-------- 192

Query: 221 LVPEAVIQCENYEHCPDYRVH--ATRNHHWSSRWFTDRNRALWSSFLIETRAGNIYFAGD 278
             PE +I+ + +E      V    T  +H S R++ D N  LW S++I+     +YF+GD
Sbjct: 193 --PERIIEFDWWEQIKREGVEFICTPANHNSGRYYLDHNATLWCSWVIKGHQETLYFSGD 250

Query: 279 TGAGDMGWSGDATRFGPIRLALIPIGA----FRFWPGQMESDAHIGPRRAVELFERLGAS 334
           + A D  ++  A R GPI LA + + A     + +P  +E+  H+  +  V+ F  L A 
Sbjct: 251 S-AYDTHFAKIAERCGPIDLACLEVAADVKQHQGYP--VENWGHMQAKHTVQAFRDLQAK 307

Query: 335 TAIPIHWGTFRLSYEKRDTP 354
             +PIHW T+ L   + D P
Sbjct: 308 KLLPIHWATYELFTHQWDEP 327