Pairwise Alignments

Query, 453 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  106 bits (264), Expect = 1e-27
 Identities = 72/267 (26%), Positives = 141/267 (52%), Gaps = 15/267 (5%)

Query: 1   MKVAKLSGDLGIRTLDLQADISELADRVTQQARTIEAISGAASQLSRDGESVSLVGQDAR 60
           ++V   S +L ++    +    E   ++ QQ   +E I+ AA++L+    +V+    +  
Sbjct: 17  VEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATELNHSVATVAQTVNETA 76

Query: 61  EKAVAARAIIDDSGRQLSTANGNFVDLIEQVSRIHARLDGFGEALKTVAHVTSVISGIAS 120
           E+A+ A  + D+   ++ +A  +  ++  ++ R++  +       + +  V +VI+ I+ 
Sbjct: 77  EQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKLLIEGEKITTVLNVINDISE 136

Query: 121 QTNLLALNATIEAARAGDAGRGFAVVAAEVKKLAQETASATQTIERSIGALT-------- 172
           QTNLLALNA IEAARAG+ GRGFAVVA EV+ LA +T+ +T+ I+ +I  L         
Sbjct: 137 QTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTEQIKANITNLNRATNTVEE 196

Query: 173 --SEAGGMLDSITHGAQTARTALSDTK-NIEALVDRLGSLMQGLSTNSEAVAERIASMVG 229
             +   G+L+        +++++ + K ++E + +R   + Q  +    A+ E I+  + 
Sbjct: 197 ELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIHQSAAEQRTAI-EEISLAIV 255

Query: 230 SASEIRTGLSALSSTSGDNADGLQRLS 256
            ASE     +++   +  NA+G +R+S
Sbjct: 256 EASE---AANSVYDRAAQNAEGTKRVS 279