Pairwise Alignments

Query, 453 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 626 a.a., Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  106 bits (264), Expect = 2e-27
 Identities = 75/249 (30%), Positives = 126/249 (50%), Gaps = 21/249 (8%)

Query: 23  ELADRVTQQARTIEAISGAASQLSRDGESVSLVGQDAREKAVAARAIIDDSGRQLSTANG 82
           E + R    A  I  +  A  +++R+    S+   +AR +A   + +++ +   +S  + 
Sbjct: 378 EQSARTNNVAAAINELGAATQEIARNASDASIQASEARNQAEDGQVVVEKTIHAMSALSA 437

Query: 83  NFVDLIEQVSRIHARLDGFGEALKTVAHVTSVISGIASQTNLLALNATIEAARAGDAGRG 142
              D   Q+ +++A  +  G       H+  VI GI+ QTNLLALNA IEAARAG+AGRG
Sbjct: 438 KISDSCTQIEQLNASTENIG-------HILDVIKGISQQTNLLALNAAIEAARAGEAGRG 490

Query: 143 FAVVAAEVKKLAQETASATQTIERSIGALTSEAG----GMLDSITHGAQTARTALSDTKN 198
           FAVVA EV+ LA  T ++   I + IG+L S +      M +S T   ++   A      
Sbjct: 491 FAVVADEVRNLAHRTQTSADEIHKMIGSLQSGSQHAVLNMNESQTSSQESVEVANQAGSR 550

Query: 199 IEALVDRLGSLMQGLSTNSEAVAERIASMVGS----ASEIRT----GLSALSSTSGDNAD 250
           +  +  R+G +  G++ +  A  E   ++V +     ++I T    G++ L+ T  D A 
Sbjct: 551 LRDVTRRIGDI-DGMNQSVAAATEEQTAVVETLNIDINQINTLNQQGVANLNETLKDCA- 608

Query: 251 GLQRLSGRV 259
            L + +GR+
Sbjct: 609 ALSQQAGRL 617



 Score = 37.4 bits (85), Expect = 1e-06
 Identities = 55/263 (20%), Positives = 115/263 (43%), Gaps = 50/263 (19%)

Query: 9   DLGIRTLDLQADISELADRVTQQART-IEAISGAASQLSRDGESVSLVGQDAREKAVAAR 67
           D+G    D+     +L  R++ Q +    A+ G+ +Q       V  V     E + A  
Sbjct: 303 DMGRAMQDIAQGEGDLTRRLSIQGKDEFAALGGSFNQF------VERVHASIVEVSSATL 356

Query: 68  AIIDDSGRQLSTANGNFVDLIEQVSRIHARLDGFGEALKTVAHVTSVISGIASQTNLLAL 127
            + D S R ++++N + V   EQ +R +              +V + I+ + + T  +A 
Sbjct: 357 QVHDLSQRVVNSSNSSIVGFDEQSARTN--------------NVAAAINELGAATQEIAR 402

Query: 128 NATIEAARAGDAGRGFAVVAAEVKKLAQETASATQTIERSIGALTSEAGGMLDSITHGAQ 187
           NA+       DA    ++ A+E +  A++       +E++I A+++ +  + DS T   Q
Sbjct: 403 NAS-------DA----SIQASEARNQAED---GQVVVEKTIHAMSALSAKISDSCTQIEQ 448

Query: 188 TARTALSDTKNIEALVDRLGSLMQGLSTNSEAVAERIASMVGSASEIRTGLSALSSTSGD 247
                 + T+NI  ++D    +++G+S  +  +A   A     A E   G + +      
Sbjct: 449 LN----ASTENIGHILD----VIKGISQQTNLLALNAAIEAARAGEAGRGFAVV------ 494

Query: 248 NADGLQRLSGRVSIASDDTNMLL 270
            AD ++ L+ R   ++D+ + ++
Sbjct: 495 -ADEVRNLAHRTQTSADEIHKMI 516