Pairwise Alignments

Query, 453 a.a., hypothetical protein from Sphingobium sp. HT1-2

Subject, 706 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  107 bits (267), Expect = 1e-27
 Identities = 77/246 (31%), Positives = 121/246 (49%), Gaps = 5/246 (2%)

Query: 19  ADISELA-DRVTQQARTIEAISGAASQLSRDGESVSLVGQDAREKAVAARAIIDDSGRQL 77
           A I+EL  D V +Q   IE++  A +++S     V+   +    +  A    +  S   L
Sbjct: 446 AKIAELTRDSVHRQYGEIESVVTAVNEMSATALEVAKASEQTAAETEAMSRNVHLSEESL 505

Query: 78  STANGNFVDLIEQVSRIHARLDGFGEALKTVAHVTSVISGIASQTNLLALNATIEAARAG 137
           + A      + ++  +    +    E+   ++ +  VIS IA+QTNLLALNA IEAARAG
Sbjct: 506 TKAMDYVTTMSQESMQAKVAVSKVAESSTNISRILEVISSIAAQTNLLALNAAIEAARAG 565

Query: 138 DAGRGFAVVAAEVKKLAQETASATQTIERSIGALTSEAGGMLDSITHGAQTARTALSDTK 197
           + GRGFAVVA EV+ LA +T S+T  I   I AL  E       I  GA+ A+ A+S T+
Sbjct: 566 EQGRGFAVVADEVRALASKTQSSTDDISVLIDALQKEVQSASAIIDKGAERAQMAVSQTE 625

Query: 198 NIEALVDRLGSLMQGLSTNSEAVAERIASMVGSASEIRTGLSALSSTSGDNADGLQRLSG 257
                ++ + S ++ +S     +A           E+   ++ +S    D+A  L RL+G
Sbjct: 626 QALTSLNSMVSQIEEISAQVTHIAAAAEEQSAVTEEVNRNITGIS----DSASELARLAG 681

Query: 258 RVSIAS 263
               +S
Sbjct: 682 EAQQSS 687