Pairwise Alignments

Query, 526 a.a., Lysyl-tRNA synthetase (class I) (EC 6.1.1.6) from Sphingobium sp. HT1-2

Subject, 533 a.a., lysine--tRNA ligase from Methanococcus maripaludis JJ

 Score =  102 bits (253), Expect = 5e-26
 Identities = 132/531 (24%), Positives = 217/531 (40%), Gaps = 53/531 (9%)

Query: 17  WPYEEARKLLKRYPNGAPEKGHILFETGYGPSGLPHIGTFNEVLRTTMVRNAYHALSDIP 76
           W    + K++K+    A E    +  +G  PSG  HIG   E L    V           
Sbjct: 3   WADATSEKIMKK--RNAEE---YVVSSGITPSGHIHIGNARETLTADAVYKGM-LKKGAE 56

Query: 77  TRLVAFSDDLDGFRKVPDNVPNQAMLAEYLGKPLTQVPDPFEKYESFAHHNNAMLREFLD 136
            +L+  +DD D  RK+   +P +    +Y+G PL+++P P    +S+A H        L+
Sbjct: 57  AKLIFIADDYDPLRKLYPFLPKE--FEKYIGMPLSEIPCPQGCCKSYADHFLMPFLNSLE 114

Query: 137 SFGFDYEFVSATEQYRAGAFDEALRQVLRRYQAIMDIMLPTLRKERQA-TYSPVLPISPK 195
             G +     A E Y+AG ++EA+   L     I + +L + RKE  A  + P+  +  K
Sbjct: 115 DLGVEITTHRANECYKAGMYNEAIITALENRLKIKE-LLDSYRKEPLADDWYPLNVVCEK 173

Query: 196 SGIVLQVPVEVVDAEAGIVRFVDE-GETIEQSILGGGAKLQWKVDWAMRWYALGVDYEMA 254
            G + +  V   ++E   + +V + G         G  KL W+VDW  RW   GV  E  
Sbjct: 174 CGKMHETKVTSYNSEDKTITYVCKCGFENTVQPFNGIGKLPWRVDWPARWNIFGVTAEPM 233

Query: 255 GKDLI---DSVTQSSKICRAL-GGRPPEGFNYE---MFLDEKGEKISKSKGNGLSLEQWL 307
           GKD      S     KI R +   + PE   YE   + + +K   +S S G   +++ W 
Sbjct: 234 GKDHAASGGSYDTGIKIARQIFNYQAPEKMVYEWIQLKIGDKAMPMSSSSGVVFAVKDWT 293

Query: 308 TYGPQESLAFYAYR-EPKKAKQLHMGVIPRAVDEYWQFRGNY----PKQAIEQQLGN--- 359
                E L F   + +P K     +  I   VD+Y +    Y     KQ  E+   N   
Sbjct: 294 EICHPEVLRFLILKGKPTKHIDFDLKAISNLVDDYDELERKYFELIEKQKTEELNDNENE 353

Query: 360 --PVHHIHDGKLPQG---ELPVTFGLLLNLVGVMGEASR---EQVWSYL--QNYVPGASA 409
              ++ +   K+P+    ++   F  ++  + +  E  +   E+V+  L    Y P   +
Sbjct: 354 KISLYELVTPKIPERLPLQVAYRFCSIIAQIALDKETQKIDMERVFDILGRNGYNPAEFS 413

Query: 410 E-TYPELDALI----------GHALAYHRDFVAPTLQRRAPHANEAAALAKLDEELAALP 458
           E     L+  +          G  L  + DF     Q       + A L    +E+  + 
Sbjct: 414 EYDKSRLEKRLYMSKKWASDYGENLEIN-DFEQAKEQYETLSEEQKAWLKAFSKEVENIE 472

Query: 459 ADASAEDIQNIVYAIGKEEAFGFAELRDWFKALYQTLLGADQGPRMGSFIA 509
            DA+   I  ++Y    +      E    F A Y+ LLG + GP++GSF+A
Sbjct: 473 IDANT--IHELMYETATKLNLAPKEA---FVASYKILLGKNYGPKLGSFLA 518