Pairwise Alignments

Query, 574 a.a., Efflux ABC transporter, permease/ATP-binding protein from Sphingobium sp. HT1-2

Subject, 582 a.a., lipid A export ATP-binding/permease MsbA from Vibrio cholerae E7946 ATCC 55056

 Score =  272 bits (696), Expect = 2e-77
 Identities = 192/575 (33%), Positives = 308/575 (53%), Gaps = 18/575 (3%)

Query: 2   LWRFATRYPARIAGALTALIVSSAATLAIPSGFRLVIDKGFTGG-GDISRWFEYLFL-LV 59
           LW +   Y A +  +  AL++++AA   + S  + ++D+GF     +  R   ++ L L+
Sbjct: 16  LWTYIRLYKAGLVVSTIALVINAAADTYMISLLKPLLDEGFGNAESNFLRILPFMILGLM 75

Query: 60  VILALASALRFYFVSWLGERVVADIRSATQANLLRQAPAFFEENRPSEIASRMTADTAII 119
            +  L+     Y +SW+   VV  +R     + +     FF++     + SR+T D+   
Sbjct: 76  FVRGLSGFASSYCLSWVSGNVVMQMRRRLFNHFMHMPVRFFDQESTGGLLSRITYDS--- 132

Query: 120 DQVVGSTVSVALRNLVTG----IGGLIYLFVLAPKLAGLLILGIPVIVLTLVTLGRRVRK 175
           +QV G+T S AL ++V      IG L  +F  + +L+ +LI+  PV+   +  + +R RK
Sbjct: 133 EQVAGAT-SRALVSIVREGASIIGLLTLMFWNSWQLSLVLIVVAPVVAFAISFVSKRFRK 191

Query: 176 LSRASQDRLAEVGSVTTEVLGAMKIVQGFGQEGREAARFDATVANGFATARQRILLRAVM 235
           +SR  Q  +  V S   ++L   K+V  +G +  E  RFD    +      + +  +++ 
Sbjct: 192 ISRNMQTAMGHVTSSAEQMLKGHKVVLSYGGQEVERKRFDKVSNSMRQQTMKLVSAQSIA 251

Query: 236 TAIAFALVFGSITGVLWLGAIDVAAGRLSGGSIAA-FVLTGGLVAGAFGSLSESWGDLLR 294
             +   +   ++  VL+L ++D     L+ G+    F    GL+     +L+    +  R
Sbjct: 252 DPVIQMIASLALFAVLFLASVDSIRAELTPGTFTVVFSAMFGLMR-PLKALTSVTSEFQR 310

Query: 295 GAGAASRLDELMAAEPAIAAPAAPVAIPTLPQGARLRFDNVHFHYPTRPDQAALNGVTID 354
           G  A   L  LM  E                    +   +V F Y  + ++ AL+ V+  
Sbjct: 311 GMAACQTLFGLMDLE----TERDNGKYEAERVNGEVDVKDVTFTYQGK-EKPALSHVSFS 365

Query: 355 IAPGETVAVVGPSGAGKSTLIQLALRFYDPDQGEVQLNDVPLPAADPAALRAAMAMVPQD 414
           I  G+TVA+VG SG+GKST+  L  RFYD D G + L+   +       LR   A+V Q+
Sbjct: 366 IPQGKTVALVGRSGSGKSTIANLFTRFYDVDSGSICLDGHDVRDYKLTNLRRHFALVSQN 425

Query: 415 SVIFAASARDNLRYG-KWDASDEEIWAAARAANAEAFLRALPQGLDSHLGEGGARLSGGQ 473
             +F  +  +N+ Y  + + + E+I  AAR A+A  F+  +PQGLD+ +GE G  LSGGQ
Sbjct: 426 VHLFNDTIANNIAYAAEGEYTREQIEQAARQAHAMEFIENMPQGLDTVIGENGTSLSGGQ 485

Query: 474 RQRVSIARALLRDAPILLLDEATSALDAESEQLVKDALDRLMQGRTTIVIAHRLATVRAA 533
           RQRV+IARALLRDAP+L+LDEATSALD ESE+ ++ ALD L + +T +VIAHRL+T+  A
Sbjct: 486 RQRVAIARALLRDAPVLILDEATSALDTESERAIQAALDELQKNKTVLVIAHRLSTIEQA 545

Query: 534 DRIIVLDQGRIVEQGDHATLVALGGLYARLASLQF 568
           D I+V+D+G I+E+G HA L+A  G YA+L  +QF
Sbjct: 546 DEILVVDEGEIIERGRHADLLAQDGAYAQLHRIQF 580