Pairwise Alignments

Query, 574 a.a., Efflux ABC transporter, permease/ATP-binding protein from Sphingobium sp. HT1-2

Subject, 720 a.a., type I secretion system permease/ATPase from Vibrio cholerae E7946 ATCC 55056

 Score =  244 bits (624), Expect = 7e-69
 Identities = 170/514 (33%), Positives = 257/514 (50%), Gaps = 9/514 (1%)

Query: 55  LFLLVVILALASALRFYFVSWLGERVVADIRSATQANLLRQAPAFFEENRPSEIASRMTA 114
           L +  VI  +   LR Y  +    R+   +      +L      FF+  +   I +R+  
Sbjct: 205 LVITGVIEVVLRGLREYQYAHTANRIDIQLGLKLVQHLFGLPLMFFKSRQVGAIVTRVRE 264

Query: 115 DTAIIDQVVGSTVSVALRNLVTGIGGLIYLFVLAPKLAGLLILGIPVIVLTLVTLGRRVR 174
              I + + GS  ++ +  L   +  L  + +L+  L GL I  +P  VL    L  R++
Sbjct: 265 LDTIREFLTGSMFTLTVELLFMFVF-LYVMSLLSAPLTGLFIATVPCYVLLAWWLTPRMQ 323

Query: 175 KLSRASQDRLAEVGSVTTEVLGAMKIVQGFGQEGREAARFDATVANGFATARQRILLRAV 234
                     A   S  TE +   + ++    E R   R+D        T      L   
Sbjct: 324 AAIEKQFSHAAANTSFLTETVAGSETLKSLAVEPRFIRRWDEQTEKMVTTGYDVQQLNNR 383

Query: 235 MTAIAFALVFGSITGVLWLGAIDVAAGRLSGGSIAAFVLTGGLVAGAFGSLSESWGDLLR 294
              +   L   +   +LWLGA +V +  ++ G + AF +    +A     + E WG  ++
Sbjct: 384 SNHLVQLLQKITSVAILWLGATEVLSLEMTIGQLIAFNMMTNHIAQPLARMVELWGQFIQ 443

Query: 295 GAGAASRLDELMAAEPAIAAPAAPVAIPTLPQGARLRFDNVHFHYPTRPD-QAALNGVTI 353
              A  +L +++         +  V I        + F N+ F Y  +PD    +N +++
Sbjct: 444 TRVAIEKLGDMLNLPVEQHTGSDNVTI-----SGAISFKNILFRY--QPDIPPTINDLSL 496

Query: 354 DIAPGETVAVVGPSGAGKSTLIQLALRFYDPDQGEVQLNDVPLPAADPAALRAAMAMVPQ 413
           DI  GET+ VVG SG+GKSTL +L LR Y P+QG + ++ +PL   +   LR  + +V Q
Sbjct: 497 DIRAGETLGVVGTSGSGKSTLARLLLRLYSPEQGSITIDGIPLNHINVQQLRQRVGVVLQ 556

Query: 414 DSVIFAASARDNLRYGKWDASDEEIWAAARAANAEAFLRALPQGLDSHLGEGGARLSGGQ 473
           ++ +F  S  +N+   K +AS EEI  AA+ + A  F+  LP G D+ L EGG  LSGGQ
Sbjct: 557 ENFLFHKSVSENIAQSKPEASLEEIIEAAKLSGAHDFILKLPMGYDTVLAEGGQSLSGGQ 616

Query: 474 RQRVSIARALLRDAPILLLDEATSALDAESEQLVKDALDRLMQGRTTIVIAHRLATVRAA 533
           RQR++IAR LL D  +L+LDEATSALD ES+ +++  +  + +GRT I IAHRL+TVR  
Sbjct: 617 RQRLAIARTLLSDPKVLILDEATSALDDESQAVIQANMASIARGRTVITIAHRLSTVRDC 676

Query: 534 DRIIVLDQGRIVEQGDHATLVALGGLYARLASLQ 567
           DRIIVL QG IVEQG H  L+A G  Y +L  LQ
Sbjct: 677 DRIIVLHQGTIVEQGSHQQLLAYGKQYKQLWQLQ 710